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Average projected future (across 5 regional climate models using the A2 emissions scenario) density (birds per hectare) model of Streaked Horned Lark (Eremophila alpestris strigata) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from 1) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Third Generation Coupled Global Climate Model (CGCM3); 2) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Community Climate System Model (CCSM); 3) Regional Climate Model v3 (RCM3) with boundary conditions driven by the Geophysical Fluid Dynamics...
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Current density (birds per hectare) model of Orange-crowned Warbler (Oreothlypis celata) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
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Current density (birds per hectare) model of Warbling Vireo (Vireo gilvus) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
Current binomial (presence/absence) model of Brown Creeper (Certhia americana) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models for numerous species. We developed a national library of environmental variables known to physiologically limit plant distributions and relied on human input based on natural history knowledge to further narrow the variable set for each species before developing habitat suitability models. We developed models using five algorithms...
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Current density (birds per hectare) model of Townsend's Warbler (Setophaga townsendi) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
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Average projected future (across 5 regional climate models using the A2 emissions scenario) density (birds per hectare) model of Rufous Hummingbird (Selasphorus rufus) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from 1) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Third Generation Coupled Global Climate Model (CGCM3); 2) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Community Climate System Model (CCSM); 3) Regional Climate Model v3 (RCM3) with boundary conditions driven by the Geophysical Fluid Dynamics Laboratory Global...
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This dataset provides spatial predictions of habitat suitability for current (1950 – 2000 yr) and mid-Holocene (8.3 ka – 4.2 ka) intervals using hindcasting, and three separate paleo-distributions calibrated on the packrat midden archive: those without bias correction (naïve), those created with a standard method (standard), and those created with a novel alternative (modeled) incorporating a three-stage model of bias. The raster layers contained here accompany the manuscript Inman et al. 2018 and were used to evaluate utility of a novel bias correction method (modeled) over classic methods. Spatial predictions of habitat suitability were created using MaxEnt version 3.4.0 (Phillips et al., 2006), a widely-used...
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Average projected future (across 5 regional climate models using the A2 emissions scenario) density (birds per hectare) model of Olive-sided Flycatcher (Contopus cooperi) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from 1) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Third Generation Coupled Global Climate Model (CGCM3); 2) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Community Climate System Model (CCSM); 3) Regional Climate Model v3 (RCM3) with boundary conditions driven by the Geophysical Fluid Dynamics Laboratory...
This project used species distribution modeling, population genetics, and geospatial analysis of historical vs. modern vertebrate populations to identify climate change refugia and population connectivity across the Sierra Nevada. It is hypothesized that climate change refugia will increase persistence and stability of populations and, as a result, maintain higher genetic diversity. This work helps managers assess the need to include connectivity and refugia in climate change adaptation strategies. Results help Sierra Nevada land managers allocate limited resources, aid future scenario assessment at landscape scales, and develop a performance measure for assessing resilience.
Categories: Data, Project; Tags: 2011, 2013, CA, California Landscape Conservation Cooperative, Conservation Design, All tags...
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Current density (birds per hectare) model of Willow Flycatcher (Empidonax traillii) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
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Current density (birds per hectare) model of Savannah Sparrow (Passerculus sandwichensis) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
Future density (birds per hectare) model of Brown Creeper (Certhia americana) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from the Canadian Regional Climate Model (CRCM) with boundary conditions driven by the Community Climate System Model (CCSM) averaged for the years 2041-2070 and available from http://www.narccap.ucar.edu/.
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Current probability of occurrence model of Scrub Jay (Aphelocoma californica) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
Future density (birds per hectare) model of Brown Creeper (Certhia americana) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from the Regional Climate Model v3 (RCM3) with boundary conditions driven by the Third Generation Coupled Global Climate Model (CGCM3) averaged for the years 2041-2070 and available from http://www.narccap.ucar.edu/.
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The "_archive_workflow_FinalModel.zip" data bundle is comprised of the metadata and Vistrails workflow that contains the following history nodes, which contain modeling workflows: "NLCD2016 state bckgrnd" and "NLCD2016 wostate bckgrnd". These nodes produced the following 9 output rasters: 1) Probability map (without state) 2) MPP threshold (without state) 3) Five percent threshold (without state) 4) Ten percent threshold (without state) 5) Probability map (with state) 6) MPP threshold (with state) 7) Five percent threshold (with state) 8) Ten percent threshold (with state) 9) Maxent MESS map
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The 'archive_raster_inputs.zip' data bundle contains '_archive_raster_inputs_XX.tif' and archive_raster_inputs_XX.xml where XX is the name of 1 of 8 input rasters that were created and used to generate these model results. The original layers and sources used to produce each predictor, as well as processing steps, are specified in each .xml file.
Current density (birds per hectare) model of Brown Creeper (Certhia americana) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
Current probability of occurrence model of Brown Creeper (Certhia americana) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from PRISM (Daly et al. 2004) averaged for the years 1971-2000.
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Average projected future (across 5 regional climate models using the A2 emissions scenario) density (birds per hectare) model of Scrub Jay (Aphelocoma californica) using a Boosted Regression Tree model (Hastie & Tibshirani 2000) informed by breeding season avian point count data, modeled vegetation types, and climate data from 1) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Third Generation Coupled Global Climate Model (CGCM3); 2) Weather Research Forecasting Grell Model (WRFG) with boundary conditions driven by the Community Climate System Model (CCSM); 3) Regional Climate Model v3 (RCM3) with boundary conditions driven by the Geophysical Fluid Dynamics Laboratory Global...


map background search result map search result map Current probability of occurrence model of Scrub Jay (Aphelocoma californica) using a Boosted Regression Tree model Townsend's Warbler Current Density (Gaussian) Warbling Vireo Current Density (Gaussian) Rufous Hummingbird Future Density (mean) Savannah Sparrow Current Density (Gaussian) Streaked Horned Lark Future Density (mean) Willow Flycatcher Current Density (Gaussian) Orange-crowned Warbler Current Density (gaussian) Olive-sided Flycatcher Future Density (mean) Scrub Jay Future Density (mean) Spatial predictions of habitat suitability for present-day (1950 – 2000 yr) and mid-Holocene (8.3 ka – 4.2 ka) time intervals INHABIT species potential distribution across the contiguous United States archive_raster_inputs archive_workflow_FinalModel Current probability of occurrence model of Scrub Jay (Aphelocoma californica) using a Boosted Regression Tree model Rufous Hummingbird Future Density (mean) Streaked Horned Lark Future Density (mean) Olive-sided Flycatcher Future Density (mean) Townsend's Warbler Current Density (Gaussian) Warbling Vireo Current Density (Gaussian) Savannah Sparrow Current Density (Gaussian) Willow Flycatcher Current Density (Gaussian) Orange-crowned Warbler Current Density (gaussian) Scrub Jay Future Density (mean) archive_raster_inputs archive_workflow_FinalModel Spatial predictions of habitat suitability for present-day (1950 – 2000 yr) and mid-Holocene (8.3 ka – 4.2 ka) time intervals INHABIT species potential distribution across the contiguous United States