Filters: Tags: phylogeography (X)44 results (10ms)
Categories: Publication; Types: Citation; Tags: Atlantic Ocean, Biogeography, Cytochromes, D 04668 Fish; Q1 01381 General; O 1050 Vertebrates, Urochord, Dispersal,
A 40,000-year woodrat-midden record of vegetational and biogeographical dynamics in north-eastern Utah, USA
Aim: A conspicuous climatic and biogeographical transition occurs at 40?45� N in western North America. This pivot point marks a north?south opposition of wet and dry conditions at interannual and decadal time-scales, as well as the northern and southern limits of many dominant western plant species. Palaeoecologists have yet to focus on past climatic and biotic shifts along this transition, in part because it requires comparisons across dissimilar records [i.e. pollen from lacustrine sediments to the north and plant macrofossils from woodrat (Neotoma) middens to the south]. To overcome these limitations, we are extending the woodrat-midden record northward into the lowlands of the central Rocky Mountains. Published...
Categories: Publication; Types: Citation, Journal Citation; Tags: Holocene, Journal of Biogeography, extinction, glacial, invasions,
Phylogeography of North American populations of the moss species Hylocomium splendens based on the nucleotide sequence of internal transcribed spacer 2 of nuclear ribosomal DNA
Comparative phylogeography and the history of endemic vertebrates in the Wet Tropics rainforests of Australia
Categories: Publication; Types: Citation; Tags: Australia, Australia, Biogeography, Climatic changes, Colonization,
Biodiversity of Costa Rican salamanders: Implications of high levels of genetic differentiation and phylogeographic structure for species formation
Categories: Publication; Types: Citation; Tags: Biological diversity, Bolitoglossa, Bolitoglossa pesrubra, Costa Rica, Costa Rica,
Genetic divergence, population structure and historical demography of rare springsnails (Pyrgulopsis) in the lower Colorado River basin.
Springsnails of the genus Pyrgulopsis are the most diverse group of freshwater gastropods in North America and current estimates show that Pyrgulopsis contains ~120 different species, many of which are at risk of extinction. Some factors contributing to their exceptional diversity include poor dispersal ability and extreme habitat specificity based on water availability, chemistry and depth. Most taxa exhibit high degrees of endemism, with many species occurring only in a single spring or seep, making springsnails ideal for studies of speciation and population structure. Here I present data from a survey of genetic variation at the mitochondrial gene cytochrome oxidase I from 37 populations and over 1000 individuals...
Categories: Publication; Types: Citation, Journal Citation; Tags: Molecular Ecology, Mollusca, Pyrgulopsis, conservation, mtDNA,
Genetic evidence for the effect of a postglacial population expansion on the phylogeography of a North American songbird
Categories: Publication; Types: Citation; Tags: Biogeography, Breeding, D 04671 Birds; G 07290 Population genetics; G 07377 Birds, Ecology Abstracts; Genetics Abstracts, Gene flow,
Categories: Publication; Types: Citation; Tags: Biological diversity, D 04140 Taiga/tundra; D 04330 Marine, Ecology Abstracts, Geographical variations, Polar environments,
Categories: Publication; Types: Citation; Tags: Biodiversity, Bioengineering Abstracts, Genes, Geographical regions, Intraspecific phylogeny,
Categories: Publication; Types: Citation; Tags: Alaska, American black bear, G 07290 Population genetics, Genetics Abstracts, Phylogeny,
These data were compiled to investigate the evolutionary history of Hilaria jamesii, Hilaria mutica, and Hilaria rigida. The data release consists of two tab delimited text files that may be used to infer population structure (viva_structure.stru) or relationships among sampling localities (viva.phylip). Files record genetic variation on an individual (.stru) or sampling locality (.phylip) level. These files may be opened and edited in a text editor program, such as Notepad ++ (PC) or BBEdit (Mac). The .phylip file can be uploaded to phyML or SVDQuartets to generate a tree-based visualization of relationships ( http://www.atgc-montpellier.fr/phyml/ or https://paup.phylosolutions.com, repectively). The .stru file...
Tags: Arizona, Botany, California, Colorado, Colorado Plateau,
These data were compiled to investigate the evolutionary history of Graham's beardtongue (Penstemon grahamii). Objective(s) of our study were to determine the evolutionary history of P. grahamii, including ancestral population sizes, the history of population divergences, and historical connectivity. In addition, we characterized population structure, genetic diversity summary statistics, and landscape factors influencing differentiation. These data represent anonymous loci sequenced from throughout the P. grahamii genome (specifically, .vcf and .structure files). Data in these files were manipulated to represent site frequency spectra between population pairs (.data files). These data were collected in 2019 from...
Categories: Publication; Types: Citation; Tags: Biogeography, Breeding, Chloroplasts, Conservation genetics, Ecological genetics,
Phylogeography of the dusky shrew, Sorex monticolus (Insectivora, Soricidae): insight into deep and shallow history in northwestern North America
Genetic distinctness of isolated populations of an endangered marsupial, the mountain pygmy-possum, Burramys parvus
Categories: Publication; Types: Citation; Tags: Australia, Burramys parvus, Conservation genetics, Ecological genetics, Endangered species,
Genetic diversity and divergence among freshwater mussel (Anodonta) populations in the Bonneville Basin of Utah.
Populations of the freshwater mussel genus Anodonta appear to be in a state of rapid decline in western North America, following a trend that unfortunately seems to be prevalent among these animals (Mollusca: Unionoida). Here we describe the patterns of molecular divergence and diversity among Anodonta populations in the Bonneville Basin, a large sub-basin of the Great Basin in western North America. Using amplified fragment length polymorphism (AFLP) analysis, we found a striking lack of nuclear diversity within some of these populations, along with a high degree of structuring among populations (FST = 0.61), suggesting post-Pleistocene isolation, due either to a long-term loss of hydrologic connectivity among...
Categories: Publication; Types: Citation, Journal Citation; Tags: AFLP, Anodonta, Bonneville Basin, Molecular Ecology, Unionoida,
Phylogeography of spotted owl (Strix occidentalis) populations based on mitochondrial DNA sequences: Gene flow, genetic structure, and a novel biogeographic pattern
Mitochondrial DNA control region sequences of spotted owls (Strix occidentalis) allowed us to investigate gene flow, genetic structure, and biogeographic relationships among these forest-dwelling birds of western North America. Estimates of gene flow based on genetic partitioning and the phylogeography of haplotypes indicate substantial dispersal within three long-recognized subspecies. However, patterns of individual phyletic relationships indicate a historical absence of gene flow among the subspecies, which are essentially monophyletic. The pattern of haplotype coalescence enabled us to identify the approximate timing and direction of a recent episode of gene flow from the Sierra Nevada to the northern coastal...
Categories: Publication; Types: Citation, Journal Citation; Tags: Evolution, Unpubl. ms, aves, biogeography, coalescent,
Comparative avian phylogeography of Cameroon and Equatorial Guinea mountains: implications for conservation
Categories: Publication; Types: Citation; Tags: Aves, Biogeography, Birds, Cameroon, Conservation genetics,