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These data were compiled to provide seed transfer and native plant materials development guidance to managers and practitioners across the Colorado Plateau and in adjacent regions. This data release contains empirical seed transfer zones derived from molecular genetic data for Cleome lutea (syn. Peritoma lutea) and Machaeranthera canescens (syn. Dieteria canescens). These species show distinct population structure (i.e., genetic differentiation) across their ranges; as such, seed transfer zones reflect both patterns of genetic differentiation and information on each species' unique adaptations to climatic gradients. These shapefile data may support successful restoration outcomes if, for example, seed transfer follows...
The Utah sucker (Catostomus ardens) is endemic to the Bonneville Basin and the upper Snake River drainage in western North America, and is thought to hybridize with the federally endangered June sucker (Chasmistes liorus mictus) in Utah Lake (Bonneville Basin). Here we describe the discovery of a major subdivision in Utah suckers (4.5% mitochondrial sequence divergence) between the ancient Snake River drainage and the Bonneville Basin. This boundary has not previously been recognized in Utah suckers based on morphologic variation, but has been recently described in two endemic cyprinids in the region. Populations in valleys east of the Wasatch Mountains in Utah clustered with the Snake River populations, suggesting...
The amount and distribution of genetic variation in 51 native (Eurasian and northern African) populations of Bromus tectorum were assessed at 25 loci using starch gel electrophoresis and were compared with our previous results for introduced (North American) populations of this predominantly cleistogamous grass. More alleles and variable loci were detected across populations in the native range than in North American populations. Within populations, however, the level of polymorphism is higher in the introduced range than in the native range. Deviation from Hardy-Weinberg expectation among native populations is almost as severe as for introduced populations. Eurasian populations exhibit greater genetic differentiation...
Natural selection may result in local adaptation to different environmental conditions across the range of a species. Understanding local adaptation, in turn, informs management decisions such as translocation to restore locally-extinct populations. We used a landscape genomics approach to detect genetic signatures of selection related to climatic variation among desert bighorn sheep populations across their indigenous range in the western United States. This approach allowed us to investigate broad patterns of both neutral and adaptive genetic variation across very different environments. Analyses suggested that ancestry and isolation by distance were the most significant forces driving genetic variation in desert...
Natural-resource managers and other conservation practitioners are under unprecedented pressure to categorize and quantify the vulnerability of natural systems based on assessment of the exposure, sensitivity, and adaptive capacity of species to climate change. Despite the urgent need for these assessments, neither the theoretical basis of adaptive capacity nor the practical issues underlying its quantification has been articulated in a manner that is directly applicable to natural-resource management. Both are critical for researchers, managers, and other conservation practitioners to develop reliable strategies for assessing adaptive capacity. Drawing from principles of classical and contemporary research and...
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These data were compiled to provide seed transfer and native plant materials development guidance to managers and practitioners across the Colorado Plateau and in adjacent regions. This data release contains empirical seed transfer zones derived from molecular genetic data for Pleuraphis jamesii (syn. Hilaria jamesii), Sphaeralcea parvifolia, and Sporobolus cryptandrus. Pleuraphis jamesii and Sphaeralcea parvifolia show distinct population structure (i.e., genetic differentiation) across their ranges ; as such, seed transfer zones reflect both patterns of genetic differentiation and information on each species' unique adaptations to climatic gradients. Sporobolus cryptandrus did not display discrete population structure...
We used variation in a portion of the mitochondrial DNA control region to examine phylogeography of Tamiasciurus hudsonicus, a boreal-adapted small mammal in the central Rocky Mountain region. AMOVA revealed that 65.66% of genetic diversity was attributable to variation within populations, 16.93% to variation among populations on different mountain ranges, and 17.41% to variation among populations within mountain ranges. Nested clade analysis revealed two major clades that likely diverged in allopatry during the Pleistocene: a southern clade from southern Colorado and a northern clade comprising northern Colorado, Wyoming, eastern Utah, and eastern Idaho. Historically restricted gene flow as a result of geographic...
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Single sequence repeat (SSR) and amplified fragment length polymorphic (AFLP) molecular marker genotypes in cheatgrass (Bromus tectorum) were compared to published data on phenotypic variation in seed dormancy, vernalization requirement, and resistance to the pathogen Ustilago bullata. Several features of cheatgrass facilitated this study: it is a recent invader in the western United States, has considerable phenotypic polymorphism, and is an obligate self-pollinator. Forty self-pollinating lines from four populations common to the three phenotypic data sets were analyzed for molecular genetic variation using seven SSR loci and 31 AFLP loci. We examined correlations between distance matrices using the Mantel test...
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Conclusions: At small spatial scales, where extirpation risks are high, landscape fragmentation will likely have long-term negative consequences on the genetic variation of individual assemblages of coastal cutthroat trout. Thresholds/Learnings: Synopsis: This study aimed to determine if coastal cutthroat trout were genetically structured within streams and to assess the effects of habitat fragmentation on coastal cutthroat trout genetic variation. Habitat fragmented by roads and other human disturbances acted as dispersal barriers, which strongly influenced coastal cutthroat trout genetic structure, diversity, and differentiation. At range-wide spatial scales, fragmentation potentially contributes to coastal cutthroat...
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These data were compiled to investigate the demographic and phylogeographic of Carex specuicola. Objectives of our study were to understand the demographic and dispersal history of Carex specuicola across hanging gardens, the hybridization history between Carex specuicola and Carex utahensis, and the population structure of Carex specuicola across its distribution. The data release consists of three tab delimited text files that may be used to infer population structure and diversity (CASP.stru), relationships among sampling localities Carex.phylip), or genetic diversity statistics and demographic history (Carex.snps.vcf). These data represent genetic variation on an individual (.stru and .vcf) or sampling locality...
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As restoration needs for natural landscapes grow due to higher frequency and/or intensity disturbances, pressure from invasive species, and impacts resulting from changing climates, considerable time and resources are being invested to guide the development and deployment of native plant materials (NPMs). Across lower elevations of the Colorado Plateau, a region composed primarily of public land where arid conditions make restoration especially challenging, NPM coordination has been spearheaded the Bureau of Land Management’s Colorado Plateau Native Plant Program (CPNPP) since 2009. To help CPNPP achieve its vision of healthy and resilient native plant communities, the Southwest Biological Science Center (SBSC)...
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Empirical evidence that local adaptation and home-site advantages are frequent across plant taxa has increased recognition that local adaptation plays a fundamental role in shaping plant responses to seed transfer (i.e., when plant materials are introduced to a site during restoration). Use of maladapted plant materials can lead to poor project outcomes if propagules exhibit poor germination or seedling survival, low population fitness, inbreeding or outbreeding depression. Accounting for local adaptation in restoration designs is a promising approach for increasing revegetation effectiveness, particularly in drylands where extreme environmental variation potentially drives high levels of selection. Consequently,...
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These data were compiled to provide seed transfer and native plant materials development guidance to managers and practitioners across the Colorado Plateau and in adjacent regions. This data release contains empirical seed transfer zones derived from molecular genetic data for Cleome serrulata (syn. Peritoma serrulata), Heliomeris multiflora, and Astragalus lonchocarpus. These species show distinct population structure (i.e., genetic differentiation) across their ranges; as such, seed transfer zones reflect both patterns of genetic differentiation and information on each species' unique adaptations to climatic gradients. These shapefile data may support successful restoration outcomes if, for example, seed transfer...
Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Arizona, Astragalus lonchocarpus, Botany, Cleome serrulata (syn. Peritoma serrulata), Colorado, All tags...
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Seed sourcing strategies that incorporate spatially explicit genetic information promote effective revegetation by reducing genetic risk factors, such as maladaptation, outbreeding, and inbreeding depression. Molecular markers represent an increasingly robust and cost- efficient data source for uncovering patterns of adaptive divergence in high-priority species to support restoration decision making. This project uses marker-based genetic analyses to develop empirical seed transfer zones for species that have been genotyped at a wide range of sites in the Mojave Desert. Empirical seed transfer zones delineate areas within which seeds may be transferred with limited risk of maladaptation or outbreeding depression....
Freshwater mussels (unionids) are increasingly recognized as important providers of ecosystem services, yet are among the most endangered fauna in the world. Because unionids are generally sessile and require specific fish hosts for development and dispersal, they are particularly vulnerable to habitat degradation. Surprisingly, little is known about the distribution of genetic diversity in freshwater mussels and this gap has a negative impact on taxonomy, monitoring, conservation and ecological research in these species. Here, we focus on western North American Anodonta, one of only three genera known to exist in this broad landscape and which contains three highly divergent lineages. We describe phylogeographical...
Current climate models predict a shift to warmer, drier conditions in the southwestern US. While major shifts in plant distribution are expected to follow these climate changes, interactions among species and intraspecific genetic variation rarely have been incorporated into models of future plant distributions. We examined the drought-related mortality of pinyon pine (Pinus edulis) in northern Arizona focusing on trees that showed genetically-based resistance or susceptibility to a nonlethal herbivore, the shoot-boring moth, Dioryctria albovittella. Because moth resistant trees have outperformed susceptible trees during 20 years of study, and herbivory has been shown to increase drought related mortality, we expected...
    map background search result map search result map Correlation between molecular markers and adaptively significant genetic variation in Bromus tectorum (Poaceae), an inbreedingannual grass Influences of barriers to movement on within-watershed genetic variation of coastal cutthroat trout Genetically informed seed transfer zones for Pleuraphis jamesii, Sphaeralcea parvifolia, and Sporobolus cryptandrus across the Colorado Plateau and adjacent regions Terrestrial Ecosystems and Restoration Science Project Empirical and Provisional Seed Transfer Zones for the Mojave Desert and Surrounding Regions (ver. 2.0, January 2021) Empirical Seed Transfer Zones for Sphaeralcea ambigua in the Mojave Desert Cleome lutea and Machaeranthera canescens seed transfer zones and distribution on the Colorado Plateau, US Carex specuicola genomic data for the southern Colorado Plateau Desert Genetically informed seed transfer zones for Astragalus lonchocarpus, Cleome serrulata, and Heliomeris multiflora across the Colorado Plateau and adjacent regions Influences of barriers to movement on within-watershed genetic variation of coastal cutthroat trout Carex specuicola genomic data for the southern Colorado Plateau Desert Empirical Seed Transfer Zones for Sphaeralcea ambigua in the Mojave Desert Genetically informed seed transfer zones for Astragalus lonchocarpus, Cleome serrulata, and Heliomeris multiflora across the Colorado Plateau and adjacent regions Correlation between molecular markers and adaptively significant genetic variation in Bromus tectorum (Poaceae), an inbreedingannual grass Cleome lutea and Machaeranthera canescens seed transfer zones and distribution on the Colorado Plateau, US Empirical and Provisional Seed Transfer Zones for the Mojave Desert and Surrounding Regions (ver. 2.0, January 2021) Genetically informed seed transfer zones for Pleuraphis jamesii, Sphaeralcea parvifolia, and Sporobolus cryptandrus across the Colorado Plateau and adjacent regions Terrestrial Ecosystems and Restoration Science Project