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Natural cave passages penetrating a coastal aquifer in the Yucatan Peninsula (Mexico) were accessed to test the hypothesis that chemoclines associated with salinity gradients (haloclines) within the flooded cave networks of the karst subterranean estuary are sites of methane oxidation. Two field trips were carried out to the fully-submerged cave system located 6.6 km inland from the coastline in January 2015 and January 2016. Vertical chemical profiles across the water column haloclines were obtained using the OctoPiPi (OPP), a high-resolution water sampler built by the U.S. Geological Survey (USGS). The sampling efforts resulted in cm-scale profiles of major ions (e.g., chloride and sulfate), as well as concentrations...
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These data were compiled to improve our understanding of how water, carbon (C), nitrogen (N), and phosphorus (P) interact to regulate below ground carbon cycling. Objective(s) of our study were to evaluate how soil heterotrophic carbon cycling responded to inputs of water, C, N, and P individually and interactively on the Colorado Plateau. These data represent soil microbial and CO2 respiration responses to amendments of carbon, nitrogen, phosphorous, and water. Soils were collected at a study site located in Arches National Park in southeastern Utah on 14 August 2017 and again on 17 July 2018 from the upper 10 cm of the soil profile in open spaces among plant canopies after the biological soil crust layer (< 1...
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Subterranean estuaries extend inland into density-stratified coastal carbonate aquifers that contain a surprising diversity of endemic animals (mostly crustaceans) within a highly oligotrophic environment. How complex ecosystems thrive in this globally-distributed, cryptic habitat (termed anchialine) is poorly understood. The northeastern margin of the Yucatan Peninsula contains over 250 km of mapped, diver-accessible caves passages where previous studies have suggested chemoautotrophic processes are the source of carbon and energy sustaining the anchialine food web. This dataset, collected during four field events during U.S. Geological Survey (USGS) Coastal and Marine Geology Program Field Activities 2015-013-FA...
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This dataset contains data supporting the paper: DeCrappeo, N.M., DeLorenze, E.J., Giguere, A.T., Pyke, D.A., and Bottomley, P.J. Fungal and bacterial contributions to nitrogen cycling in cheatgrass-invaded and uninvaded native sagebrush soils of the western USA (accepted at the journal Plant and Soil). The purpose of the study was to evaluate the relative contributions of soil bacteria and fungi to inorganic nitrogen (N) cycling in sagebrush and cheatgrass-invaded soils using a 15N isotope dilution experiment. Soils were collected from sagebrush and cheatgrass rhizospheres at six paired sites in southwest Idaho and southeast Oregon. In order to partition the contribution of each microbial group to N cycling, soils...
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Mono Lake is a hypersaline soda lake rich in dissolved inorganic arsenic with its primary production currently dominated by Picocystis str. ML. We set out to determine if this picoplankter could metabolize inorganic arsenic, and in doing so form unusual arsenolipids (e.g., methylated arsinoyl ribosides) as reported in other saline ecosystems and by halophilic algae. We cultivated Picocystis str. ML on an inorganic seawater-based medium with either low (37 µM) or high (1,000 µM) phosphate in the presence of arsenite (~0.4 mM), arsenate (~0.8 mM), or without arsenic additions.
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Geochemical data were obtained to investigate the fate and transport of nitrogen in a subterranean estuary near East Falmouth, Massachusetts. The goal of this investigation was to assess nitrogen attenuation in the aquifer under the Eel River Estuary and the adjacent peninsula that was densely populated with residences having septic systems and legacy cesspool inputs of inorganic nitrogen. This estuary is one of many small embayments on Cape Cod where nutrient enrichment can lead to eutrophication and is a major concern for water-quality impairment. Groundwater water-quality data were collected from 3 transects from a total of 27 locations that were sampled between November 2015 and October 2016. Samples were...
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This data set consists of chemical and stable isotope data obtained through the analysis of discrete water samples collected from 14 fixed sampling locations in the northern Sacramento-San Joaquin Delta at roughly monthly intervals between April 2011 and November 2012.
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The Geology, Energy & Minerals Science Center (GEMSC) is a research center within the U.S. Geological Survey (USGS) that conducts comprehensive, interdisciplinary research, assessments, and surveys of the origin, occurrence, distribution, quantity, composition, and environmental effects of geologic energy materials, minerals, associated deposits, and waste materials. Additionally, GEMSC scientists are working on a broad range of current and emerging geology, energy, and minerals issues including evaluating waters produced during oil and gas extraction; identifying wastes that can be recovered or repurposed and used in new processes; conducting studies and assessments of critical minerals and rare earth elements;...
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Bacterial Data include results of incubations of lakewater bacteria with dissolved organic matter extracted from Colorado glacier or rock glacier outflows in 2015. Cells were counted pre- and post- incubations. The “Counts” tab is the number of cells counted in each view of the microscope using the acridine orange method. “C Calculations” tab is the calculation of carbon as bacterial biomass from cell counts. ”Change in cell counts” is the difference in the number of bacterial cells from the pre-incubation microbial culture and in each assay bottle after the biological oxygen demand incubation. The third tab, “Carbon use efficiency” is calculated as the amount of DOM from oxygen demand assays converted to microbial...
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Note: This data release has been deprecated. Please see new data release here: https://doi.org/10.5066/P9A4FVZ4. The data presented here was collected adjacent to USGS stream gage 06730200 and includes both observed and modeled values. Dissolved oxygen, dissolved carbon dioxide, stream depth, water temperature, and light intensity were collected via passive water quality sensors. Modeled values include gross primary production, ecosystem respiration, net ecosystem production, reaeration, and light (when observed values were unavailable). Modeled values were obtained through streamMetabolizer, a USGS-sponsored R-package for estimating rates of stream metabolism. Estimates for carbon dioxide flux utilized both modeled...
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This product consists of multiple tabular datasets and associated metadata of water quality information related to rivers, streams, and lakes in the Yukon River watershed between 2014 and 2018. This data release is apart of the National Aeronautics and Space Administration (NASA) funded Arctic-Boreal Vulnerability Experiment (ABoVE) and is an assessment of water quality and greenhouse gas fluxes within the interior of Alaska. Sampling frequency varied across locations, with some sites sampled twice a year or more. Data consist of: organic and inorganic carbon related species, carbon dioxide and methane gas fluxes calculated from manual chamber measurements, nitrogen species, carbon isotopes, oxygen and deuterium...
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Assessment of biogeochemical processes and transformations at the aquifer-estuary interface and measurement of the chemical flux from submarine groundwater discharge (SGD) zones to coastal water bodies are critical for evaluating ecosystem service, geochemical budgets, and eutrophication status. The U.S. Geological Survey and the University of Delaware measured rates of SGD and concentrations of dissolved constituents, including nitrogen species, from recirculating ultrasonic and manual seepage meters, and in nearshore groundwater, on the southern shore of Guinea Creek, an estuarine tributary of Rehoboth Bay, in Millsboro, Delaware, in June, August, and October of 2015. A novel oxygen- and light-regulated seepage...
This data release is associated with a journal article titled, "Aquatic-Terrestrial Linkages Control Metabolism and Carbon Dynamics in a Mid-sized, Urban Stream Influenced by Snowmelt." The data were collected adjacent to USGS stream gage 06730200 and include observed and modeled values. Dissolved oxygen, dissolved carbon dioxide, stream depth, water temperature, and light intensity were collected via passive water quality sensors. Modeled values include gross primary production, ecosystem respiration, net ecosystem production, reaeration, and light (when observed values were unavailable). Modeled values were obtained through streamMetabolizer, a USGS-sponsored R-package for estimating rates of stream metabolism....
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These data were compiled to understand the responses of dryland ecosystem properties to long-term simulated atmospheric nitrogen deposition. Objective(s) of our study were to uncover any changes in soil biogeochemistry and ecosystem properties to long-term nitrogen amendments. These data represent ecosystem property data compiled over the nine-year history of a nitrogen deposition simulation experiment. These data were collected from three sites representing a gradient of soil texture in Arches National Park. Data collection began in 2013 and continued through 2019, though metrics were collected at a range of intervals within that timeframe. These data were collected by U.S. Geological Survey field technicians using...
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Natural cave passages penetrating a coastal aquifer in the Yucatan Peninsula (Mexico) were accessed to investigate how regional meteorology and hydrology control methane dynamics in karst subterranean estuaries. Three field trips were carried out in January 2015, June 2015, and January 2016 to obtain year-long high-resolution temporal records of water chemistry and environmental parameters below and above the surface at a site (Cenote Bang) within the Ox Bel Ha cave network. These efforts resulted in chemical records of dissolved methane concentrations and its stable carbon isotopic content and major ion concentrations (i.e., chloride and sulfate) in approximately 2.5-day resolution from January 2015 to January...
Dust storms have a number of impacts upon the environment including radiative forcing, and biogeochemical cycling. They transport material over many thousands of kilometres. They also have a range of impacts on humans, not least on human health. In recent years the identification of source areas for dust storms has been an important area or research, with the Sahara (especially Bodélé) and western China being recognised as the strongest sources globally. Another major development has been the recognition of the degree to which dust storm activity has varied at a range of time scales, millennial, century, decadal, annual and seasonal. Published in Journal of Environmental Management, volume 90, issue 1, on pages...
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Natural attenuation of organic contaminants in groundwater can give rise to a series of complex biogeochemical reactions that release secondary contaminants to groundwater. In a crude oil contaminated aquifer, biodegradation of petroleum hydrocarbons is coupled with the reduction of ferric iron (Fe(III)) hydroxides in aquifer sediments. As a result, naturally occurring arsenic (As), adsorbed to Fe(III) hydroxides in the aquifer sediment, is mobilized from sediment into groundwater. However, Fe(III) in sediment of other zones of the aquifer has the capacity to attenuate dissolved As via re-sorption. To better evaluate how long-term biodegradation coupled with Fe-reduction and As mobilization can redistribute As mass...
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Pipelines carrying acid mine drainage at Iron Mountain and Leviathan Mines (CA, USA) develop pipe scale, a precipitate that forms inside the pipelines. The U.S. Geological Survey is studying the composition of the pipe scale and the acid mine drainage water flowing through the pipeline through field samples and laboratory experimentation. This data release provides the data from the studies of the pipelines from 2012-2015 as a data compendium to a journal publication, and includes (1) water chemistry of the acid mine drainage; (2) mineralogy of pipe scale (X-ray diffraction and chemical extractions); and (3) laboratory experiment results.
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Natural cave passages penetrating coastal aquifers in the Yucatan Peninsula (Quintana Roo, Mexico) were accessed to investigate how regional meteorology and hydrology control dissolved organic carbon and methane dynamics in karst subterranean estuaries, the region of aquifers where fresh and saline waters mix. Three field trips were carried out in December 2013, August 2014, and January 2015 to obtain 1) physicochemical and 2) geochemical data from the water column and 3) temporal records of water chemistry and hydrological parameters below and above the surface at three sites within the Ox Bel Ha cave (Cenote Jailhouse, Cenote Naach Wennen Ha, and Cenote Odyssey) and another cave (Cenote Crustacea). These efforts...
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This dataset includes the field measurements and laboratory analyses of surface water, seston, fish tissue, and sediment samples collected from Bighorn Lake, within Bighorn Canyon National Recreation area (BICA), during high flow (July 2015) and low flow (August 2016) conditions. The study area includes 7-9 sampling sites that follow a transect spanning the entire length of the reservoir from the Bighorn and Shoshone River inflows to the afterbay and tailwater below Yellowtail dam. Multiple samples were collected at each sampling site and usually included the top 2 cm of sediment at the sediment/water interface, 2 meters above the sediment/water interface, and 2 meters below the reservoir surface. Microbial samples...
map background search result map search result map Nitrogen cycling rates from sagebrush and cheatgrass-invaded soils in the Northern Great Basin (2008) Arsenic and Iron data (2010-2015) for petroleum plume mass balance, Bemidji MN Sonde data to characterize physical and chemical properties of the Cenote Bang, a component of the Ox Bel Ha cave network within the subterranean estuary coastal aquifer of the Yucatan Peninsula, from December 2013 to January 2016 Data for Biogeochemical and Physical Processes Controlling Mercury and Selenium Bioaccumulation in Bighorn Lake, Bighorn Canyon National Recreation Area, Montana and Wyoming, 2015-2016 Geochemical Data Supporting Analysis of Fate and Transport of Nitrogen in the Nearshore Groundwater and Subterranean Estuary near East Falmouth, Massachusetts, 2015-2016 Water quality and gas fluxes of Interior Alaska (2014-2018) Temporal hydrologic and chemical records from the Ox Bel Ha cave network within the coastal aquifer of the Yucatan Peninsula, from January 2015 to January 2016 Field and Laboratory data of pipe scale forming in acid mine drainage pipelines at Iron Mountain and Leviathan Mines, California Laboratory Incubation results from 2015 for bacterial cell counts, carbon use efficiency, growth efficiency, and dissolved organic matter chemistry from four glacier outflows and four rock glacier outflows in Colorado Vertical chemical profiles collected across haloclines in the water column of the Ox Bel Ha cave network within the coastal aquifer of the Yucatan Peninsula in January 2015 and January 2016 Growth of cultured Picocystis strain ML in the presence of arsenic, and occurrence of arsenolipids in these Picocystis as well as biota and sediment from Mono Lake, California Chemical and Stable Isotope Data for Discrete Water Samples Collected in the Northern Sacramento-San Joaquin Delta, 2011-2012 Nearshore groundwater seepage and geochemical data measured in 2015 at Guinea Creek, Rehoboth Bay, Delaware Modeled Stream Metabolism in Boulder Creek near Boulder, CO (2016 - 2018) Modeled Stream Metabolism in Boulder Creek near Boulder, CO (2016 - 2018) CO2 concentrations and microbial biomass data derived from incubation experiments on soils collected at Arches National Park in 2017 and 2018 Ecological property data and experimental lab incubation results from a long-term nitrogen deposition simulation experiment in three semi-arid grasslands, Arches National Park, Utah, USA, 2013-2019 Sonde data to characterize physical and chemical water column properties of flooded caves (Ox Bel Ha and Cenote Crustacea) within the coastal aquifer of the Yucatan Peninsula, Quintana Roo, from December 2013 to January 2015 Nearshore groundwater seepage and geochemical data measured in 2015 at Guinea Creek, Rehoboth Bay, Delaware Modeled Stream Metabolism in Boulder Creek near Boulder, CO (2016 - 2018) Modeled Stream Metabolism in Boulder Creek near Boulder, CO (2016 - 2018) Geochemical Data Supporting Analysis of Fate and Transport of Nitrogen in the Nearshore Groundwater and Subterranean Estuary near East Falmouth, Massachusetts, 2015-2016 Ecological property data and experimental lab incubation results from a long-term nitrogen deposition simulation experiment in three semi-arid grasslands, Arches National Park, Utah, USA, 2013-2019 Sonde data to characterize physical and chemical water column properties of flooded caves (Ox Bel Ha and Cenote Crustacea) within the coastal aquifer of the Yucatan Peninsula, Quintana Roo, from December 2013 to January 2015 Sonde data to characterize physical and chemical properties of the Cenote Bang, a component of the Ox Bel Ha cave network within the subterranean estuary coastal aquifer of the Yucatan Peninsula, from December 2013 to January 2016 Vertical chemical profiles collected across haloclines in the water column of the Ox Bel Ha cave network within the coastal aquifer of the Yucatan Peninsula in January 2015 and January 2016 Growth of cultured Picocystis strain ML in the presence of arsenic, and occurrence of arsenolipids in these Picocystis as well as biota and sediment from Mono Lake, California Temporal hydrologic and chemical records from the Ox Bel Ha cave network within the coastal aquifer of the Yucatan Peninsula, from January 2015 to January 2016 Chemical and Stable Isotope Data for Discrete Water Samples Collected in the Northern Sacramento-San Joaquin Delta, 2011-2012 Data for Biogeochemical and Physical Processes Controlling Mercury and Selenium Bioaccumulation in Bighorn Lake, Bighorn Canyon National Recreation Area, Montana and Wyoming, 2015-2016 Arsenic and Iron data (2010-2015) for petroleum plume mass balance, Bemidji MN Nitrogen cycling rates from sagebrush and cheatgrass-invaded soils in the Northern Great Basin (2008) Field and Laboratory data of pipe scale forming in acid mine drainage pipelines at Iron Mountain and Leviathan Mines, California Water quality and gas fluxes of Interior Alaska (2014-2018)