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This dataset provides supporting information for the species distribution data used in the associated manuscript. Collections of five non-native fish species were made by a number of institutions, and several capture techniques were used. This dataset also includes number of individuals of each species captured at each locality.
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This dataset includes field data for fishes sampled using gill nets during daylight hours in the Northern Sacramento-San Joaquin Delta, California, USA. This data release includes all measured environmental parameters and fish taxa included in the analysis. First posted - August 19, 2019 (available from author) Revised - December 18, 2019 (version 1.1)
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Data are time series of substrate grain size, remotely sensed water column turbidity, and measures of abundance (e.g., density, percent cover) of the nearshore subtidal (3-17 m depth) benthic community (vegetation, invertebrates, and fish) collected before (2008-2011) and during dam removal (2012-2014).
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This collection of GIS layers was prepared for the report Alaska Arctic Marine Fish Ecology Catalog (U.S. Geological Survey Scientific Investigations Report 2016–5038). The layers display geographic distribution and sampling locations for Arctic marine fish species in the region of United States sectors of the Chukchi and Beaufort Seas. Certain diadromous species (for example, Pacific salmon, char, and whitefishes) are treated as marine fishes (McDowall, 1987) because much of their life cycle is in marine and brackish environments. This synthesis of information is meant to provide current information and understanding of this fauna and its relative vulnerability to changing Arctic conditions. There are 104 species...
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These datasets contain aquatic macroinvertebrate and water quality data collected from 159 wetlands in Montana and North Dakota within the Prairie Pothole Region of the Williston Basin.
Interest in the field of environmental DNA (eDNA) is growing rapidly and eDNA surveys are becoming an important consideration for aquatic resource managers dealing with invasive species. However, in order for eDNA monitoring to mature as a research and management tool, there are several critical knowledge gaps that must be filled. One such gap is the fate of eDNA materials in the aquatic environment. Understanding the environmental factors that influence the decay of eDNA and how these factors impact detection probabilities over time and space could have significant implications for eDNA survey design and data interpretation. Here we experimentally explore eDNA decay in waste materials and reproductive cells obtained...
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This data release contains environmental and quality control results for chemical, biological, and physical sampling of water and bed sediment from Albemarle Sound and associated tributaries between 2012 and 2014 referenced in USGS OFR 2016-1171. Appendix 1 contains all quality control results to characterize the bias and variability of sampling, handling, and analysis of water, phytoplankton, and bed sediment samples. Appendix 2 contains all the chemical, biological, and physical results for water samples collected in July and August of 2012. Appendix 3 contains all the chemical, biological, and physical results for water samples collected from March 2013 to February 2014. Data are included for discrete samples...
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The Fisheries and Wildlife Resources Group combines the expertise of professional fisheries scientists, wildlife biologists, environmental regulatory specialists, and environmental chemists, to conduct a wide variety of multidisciplinary environmental field and laboratory studies concerning aquatic and terrestrial habitats, wildlife, water quality, and environmental impacts.
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The dataset includes multiple file types (CSV, ArcGIS shapefiles, and images), data relates to the elemental analysis of fish otoliths. Otoliths examined in this study were from randomly-sampled individual Tidewater Goby (Eucyclogobius newberryi) and Prickly Sculpin (Cottus asper) from the adult population of Rodeo Lagoon and Rodeo Creek, Marin County, California. The fish were collected in April and August 2016.
Hydroacoustic estimates of fish density are used for fisheries management in central Lake Erie. Hydroacoustic data were collected along up to four cross-lake transects in central Lake Erie July 2010 through July 2019. Software-generated raw variables used for calculating estimates of hydroacoustic fish densities are presented here.
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These data were collected from the TOPGUN-SODA10 2AK core collected in 2010 by LacCore (University of Minnesota), the USGS. and the University of California (U.C.) Berkeley. The 8.9 meter length core had stable isotopes of oxygen and carbon sampled every 10 millimeters or so, and diatoms samples at every 50 millimeters to 200 millimeters depending on the depth in the core. mineralogic data were collected using X-ray diffraction and grain-size analysis were done at various depths. These data are used to interpret the Holocene and late Pleistocene hydrology and paleoclimate of the lake and the region. The interpretation can be found in: Rosen, M.R., Reidy, L., Starratt, S., Zimmerman, S., in review, Middle Holocene...
Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey (USGS), in cooperation with the U.S. Environmental Protection Agency.
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These data describe the catch and biological data from 363 bottom-set gill-net lifts distributed throughout Lake Michigan (including main basin and Green Bay) between April and November in 1930–1932. Data collected from the R/V Fulmar were recorded in notebooks and are now archived at the U.S. Geological Survey’s Great Lakes Science Center. Each lift included 1–7 gangs of linen gill nets. Each gang comprised 3–5 panels each having a length of 155 m, a height of 1.5 m, and a (stretch-)mesh size of either 60, 64, 67, 70, or 76 mm. The digitization of the Fulmar data notebooks was started in the late 1990s and finished in this study.
Data from metabarcoding assays to detect a suite of mussel species using mitochondrial DNA regions of the cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit (ND1) genes sequences.
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This data release contains estimates of mean daily gross primary production (GPP) and ecosystem respiration (ER) in Bronson and Fanno Creeks, Oregon during August of 2016. These estimates were part of a larger study of the water-quality effects of beaver dams and beaver activity in selected urban streams of the Tualatin River Basin in northwestern Oregon. The mean daily GPP and ER values were estimated using two approaches (both of which are publicly available and documented): 1) a USGS model developed using the R programming language and 2) a Washington Department of Ecology model that runs in Excel. Inputs for the models included hourly measurements of dissolved-oxygen concentration, water temperature, photosynthetically...
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The Fluvial Egg Drift Simulator (FluEgg) estimates bighead, silver, and grass carp egg and larval drift in rivers using species-specific egg developmental data combined with user-supplied hydraulic inputs (Garcia and others, 2013; Domanski, 2020). This data release contains results from 240 FluEgg 4.1.0 simulations of bighead carp eggs in the Illinois River under steady flow conditions. The data release also contains the hydraulic inputs used in the FluEgg simulations and a KML file of the centerline that represents the model domain. FluEgg simulations were run for all combinations of four spawning locations, six water temperatures, and ten steady flow conditions. Each simulation included 5,000 bighead carp eggs,...
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These data were compiled for a manuscript in which 1) we develop a water temperature model for the major river segments and tributaries of the Colorado River basin, including the Colorado, Green, Yampa, White, and San Juan rivers; 2) we link modeled water temperature to fish population data to predict the probability native and nonnative species will be common in the future in a warming climate; and 3) assess the degree to which dams create thermal discontinuity in summer in river segments across the western US. Per goal #1, we developed a water temperature model using data spanning 1985-2015 that predicts water temperature every 1 mile (1.6-km) in rivers both now and in the future due to the potential influence...
Tags: Aquatic Biology, Arizona, Arkansas River basin, Black Rocks, Colorado, All tags...
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Macroinvertebrate samples were collected from streams tributary to Honnedaga Lake and from the Middle Branch of the Black River during 2012-2016 and analyzed for methylmercury concentrations and for stable isotope ratios of nitrogen and carbon. Macroinvertebrates were identified in the field, and the level of taxonomic resolution varied from order to species; most taxa were identified to the family level. Specimens were field-processed into composite samples, field-frozen, and submitted to the mercury laboratory for freeze-drying and analysis. Subsamples were then submitted to the stable isotope laboratory for analysis of nitrogen and carbon isotope ratios. This database contains the resulting data and associated...
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Ecological models facilitate evaluation and assessment of alternative plans for restoring the Greater Everglades ecosystem. Modeling outputs were used in evaluations of alternative water control plans to be performed by the Combined Operational Plan (COP). The models used were: (1) Cape Sable Seaside Sparrow Marl Prairie Indicator in conjunction with (2) Cape Sable Seaside Sparrow Helper, (3) Florida apple snail (native) population model (EverSnail), (4) Wader Distribution Evaluation Modeling (WADEM), (5) Small-sized freshwater fish density, and (6) Alligator production probability (i.e., habitat suitability index (HSI)). These ecological models are used to examine potential impacts on the above listed flora and...


map background search result map search result map Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14, Appendix 3 Dataset for Alaska Marine Fish Ecology Catalog Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Data collected in 2008-2014 to assess nearshore subtidal community responses to increased sediment load during removal of the Elwha River dams, Washington State, USA Macroinvertebrate and water quality data from the Prairie Pothole Region of the Williston Basin (2014-2016) Abundance and Distribution of Fishes in the Northern Sacramento-San Joaquin Delta, California, 2017-2018 (ver. 1.1, December 2019) Otolith chemistry of fishes in Rodeo Lagoon, Marin County, California, 2016 Water-Quality, Bed-Sediment, and Invertebrate Tissue Trace Element Concentrations for Tributaries in the Clark Fork Basin, Montana, October 2017 - September 2018 Methylmercury and associated data in macroinvertebrates from tributaries of Honnedaga Lake and from the Middle Branch Black River in New York. Mineralogic, grain-size, biologic, and stable isotopic analyses of core TOPGUN-SODA10 2A-K from Big Soda Lake, Nevada, USA 1930-1932 Gill net data from Lake Michigan Ecological modeling output for the Combined Operational Plan, Round 3 in the Greater Everglades, 2018-2019 Estimates of mean daily gross primary production and ecosystem respiration in beaver-affected reaches along Bronson and Fanno Creeks, OR Fluvial Egg Drift Simulator (FluEgg) Results for 240 Simulations of Bighead Carp Egg and Larval Drift in the Illinois River Water temperature models, data and code for the Colorado, Green, San Juan, Yampa, and White rivers in the Colorado River basin Hydroacoustic data from central Lake Erie, 2010-2019 Metabarcoding data from freshwater mussel eDNA collected in Clinch River, Virginia 2017 Otolith chemistry of fishes in Rodeo Lagoon, Marin County, California, 2016 Mineralogic, grain-size, biologic, and stable isotopic analyses of core TOPGUN-SODA10 2A-K from Big Soda Lake, Nevada, USA Abundance and Distribution of Fishes in the Northern Sacramento-San Joaquin Delta, California, 2017-2018 (ver. 1.1, December 2019) Estimates of mean daily gross primary production and ecosystem respiration in beaver-affected reaches along Bronson and Fanno Creeks, OR Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Methylmercury and associated data in macroinvertebrates from tributaries of Honnedaga Lake and from the Middle Branch Black River in New York. Metabarcoding data from freshwater mussel eDNA collected in Clinch River, Virginia 2017 Ecological modeling output for the Combined Operational Plan, Round 3 in the Greater Everglades, 2018-2019 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14, Appendix 3 Hydroacoustic data from central Lake Erie, 2010-2019 Macroinvertebrate and water quality data from the Prairie Pothole Region of the Williston Basin (2014-2016) Water-Quality, Bed-Sediment, and Invertebrate Tissue Trace Element Concentrations for Tributaries in the Clark Fork Basin, Montana, October 2017 - September 2018 Fluvial Egg Drift Simulator (FluEgg) Results for 240 Simulations of Bighead Carp Egg and Larval Drift in the Illinois River 1930-1932 Gill net data from Lake Michigan Water temperature models, data and code for the Colorado, Green, San Juan, Yampa, and White rivers in the Colorado River basin Dataset for Alaska Marine Fish Ecology Catalog