To understand the genetic structure of six rare plant species (Acanthomintha ilicifolia, Baccharis vanessae, Chloropyron maritimum ssp. maritimus, Deinandra conjugens, Dicranostegia orcuttiana, Monardella viminea), we obtained samples from known occurrences in San Diego County, prepared and sequenced ddRAD genomic libraries, and developed and analyzed a panel of genetic markers to assess population diversity and divergence. We provide this SNP genotype dataset in Structure format, produced in Stacks v2.0b8, for future monitoring efforts and population genetic analysis. These data support the following publication: Milano, E.R., and Vandergast, A.G., 2018, Population genomic surveys for six rare plant species in...
U-series isotope data used to date a 130,000-year-old archaeological site in southern California, U.S.A.
This dataset includes tables with physical information and isotopic data that are used to calculate uranium-series ages (230Th/U method) and initial 234U/238U activity ratios on a suite of mastodon bones from the Cerutti Mastodon site near San Diego, CA area.
Data presented are results of surveys for California gnatcatchers and vegetation sampling conducted in 2015, 2016, and 2020 to address two inter-related questions: (1) How have gnatcatchers and their habitat recovered in areas burned by wildfires in 2003, 2007, and 2014?, and (2) What is the current regional occupancy of gnatcatchers throughout their southern California range? Data for the post-fire study were collected in 2015, 2016, and 2020, while the regional occupancy survey was conducted in 2016, and 2020. In 2015, gnatcatcher occupancy as a function of fire history was derived from 324 points in the following fire categories: 2003-2006 (106 points), 2007-2010 (111 points), and 2011-2014 (107 points). In 2016,...
Map showing Existing and Proposed Hardline Preserves within the City of Carlsbad Habitat Management Plan and associated Biological Core and Linkage Areas
Map showing current year and cumulative habitat losses and gains in approved subareas within the Multiple Species Conservation Program and Pre-approved Mitigation Areas.
Chloropyron maritimum subsp. maritimum population counts, tide, and weather data for Sweetwater Marsh National Wildlife Refuge
Chloropyron maritimum subsp. maritimum population counts at Sweetwater Marsh National Wildlife Refuge, California, and tide and weather data from San Diego, California, are used to explain interannual variation in Chloropyron counts and to predict past population counts.
DNA fingerprinting of Southern Mule Deer (Odocoileus hemionus fuliginatus) to determine movement across California State Route 67
The goal of this project was to primarily assess east-west connectivity across Route 67 and secondarily, north-south connectivity across Scripps Poway Parkway and Poway Road, two highly trafficked roads to the west of Route 67. We collected deer scat piles from both sides of these crossings in spring between March and June of 2015, and again in fall throughout October 2015. Collected pellets were extracted and amplified using protocols and loci developed by Bohonak and Mitelberg (2014). DNA fingerprinting results were used to investigate mule deer movement in the region directly by identifying individuals which had been captured multiple times throughout the study period. We also assessed movement indirectly through...