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To understand the genetic structure of six rare plant species (Acanthomintha ilicifolia, Baccharis vanessae, Chloropyron maritimum ssp. maritimus, Deinandra conjugens, Dicranostegia orcuttiana, Monardella viminea), we obtained samples from known occurrences in San Diego County, prepared and sequenced ddRAD genomic libraries, and developed and analyzed a panel of genetic markers to assess population diversity and divergence. We provide this SNP genotype dataset in Structure format, produced in Stacks v2.0b8, for future monitoring efforts and population genetic analysis. These data support the following publication: Milano, E.R., and Vandergast, A.G., 2018, Population genomic surveys for six rare plant species in...
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This zip folder contains ASCII text files of vectors at the specified volcano at 12-hour intervals, from January 1, 1990 through December 28, 2009. The wind vectors are divided into five files, names by their elevation range above sea level in the atmosphere: 00-05km.txt; 05-11km.txt; 11-16km.txt; 16-24km.txt; and 24-30km.txt. The zip folder also contains a subfolder "figures", with Wind rose plots of wind direction and speed over this time period. The plots are by season, and by elevation, given a total of 20 plots (4 seasons, 5 elevation ranges). A summary plot is also included which gives the year-round wind pattern at the volcano, at 0-5 km elevation. Plots are in both jpg and pdf format.
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The data set consists of 12 input data rasters that cover San Diego County, California. These input rasters represent criteria used in a Pareto ranking algorithm in the manuscript. These include three rasters related to fire threats, three rasters related to habitat fragmentation threats, four rasters related to species biodiversity, and two rasters related to genetic biodiversity. (see the PLOS ONE paper for details). These data support the following publication: Tracey JA, Rochester CJ, Hathaway SA, Preston KL, Syphard AD, Vandergast AG, et al. (2018) Prioritizing conserved areas threatened by wildfire and fragmentation for monitoring and management. PLoS ONE 13(9): e0200203. https://doi.org/10.1371/journal.pone.0200203
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This dataset includes tables with physical information and isotopic data that are used to calculate uranium-series ages (230Th/U method) and initial 234U/238U activity ratios on a suite of mastodon bones from the Cerutti Mastodon site near San Diego, CA area.
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This zip folder contains ASCII text files of vectors at the specified volcano at 12-hour intervals, from January 1, 1990 through December 28, 2009. The wind vectors are divided into five files, names by their elevation range above sea level in the atmosphere: 00-05km.txt; 05-11km.txt; 11-16km.txt; 16-24km.txt; and 24-30km.txt. The zip folder also contains a subfolder "figures", with Wind rose plots of wind direction and speed over this time period. The plots are by season, and by elevation, given a total of 20 plots (4 seasons, 5 elevation ranges). A summary plot is also included which gives the year-round wind pattern at the volcano, at 0-5 km elevation. Plots are in both jpg and pdf format.
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This data release includes three types of data used in habitat modeling, and predictions from the habitat models. (1) Predictor rasters for proportion urban development within 1-km radius, proportion exurban within 1-km radius, vector ruggedness measure (VRM) within 500-m radius, topographic position index (TPI) within 500-m radius. (2) Twenty-nine null models for space use for 29 different golden eagles. (3) Twenty-nine response variable rasters of eagle locations per cell for 29 golden eagles. (4) A raster for predicted population-level probability of habitat selection and contours for predicted population-level probability of habitat selection and contours. These data support the following publication: Tracey,...
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Chloropyron maritimum subsp. maritimum population counts at Sweetwater Marsh National Wildlife Refuge, California, and tide and weather data from San Diego, California, are used to explain interannual variation in Chloropyron counts and to predict past population counts.


    map background search result map search result map U-series isotope data used to date a 130,000-year-old archaeological site in southern California, U.S.A. Wind rose plots for the volcano: 343001 San Diego Wind rose plots for the volcano: 351001 San Diego Predictor, null model, response variable, and habitat suitability prediction rasters for a golden eagle hierarchical Bayesian synoptic model used for habitat selection in San Diego County, California. Derived from golden eagle data collected from November 2014-February 2017 Chloropyron maritimum subsp. maritimum population counts, tide, and weather data for Sweetwater Marsh National Wildlife Refuge Genotypes for six rare plant species found in San Diego County in 2016-2017 Raster data files for “Prioritizing conserved areas threatened by wildfire for monitoring and management." U-series isotope data used to date a 130,000-year-old archaeological site in southern California, U.S.A. Chloropyron maritimum subsp. maritimum population counts, tide, and weather data for Sweetwater Marsh National Wildlife Refuge Genotypes for six rare plant species found in San Diego County in 2016-2017 Predictor, null model, response variable, and habitat suitability prediction rasters for a golden eagle hierarchical Bayesian synoptic model used for habitat selection in San Diego County, California. Derived from golden eagle data collected from November 2014-February 2017 Raster data files for “Prioritizing conserved areas threatened by wildfire for monitoring and management."