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Both Green (Acipenser medirostris) and White Sturgeon (Acipenser transmontanus) are long-lived species with delayed and intermittent spawning that require large amounts of connected habitat to complete their life cycle. Both species use inshore marine and estuarine habitat along with rivers for juvenile and adult habitat and require clean substrates in rivers to successfully spawn. Hydropower dams are barriers to movements of these species in Pacific rivers and have negatively affected spawning success by creating unstable daily water flow patterns through peaking power operations as has been documented in other sturgeon species. For example, the fragmentation of the Columbia River by dams has created 17 land-locked...
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The Pahrump Poolfish (Empetrichthys latos) is an endangered endemic springfish and is the only remaining species in its genus, Empetrichthys. Originally occurring only in a large spring in southern Nevada, its entire historic habitat was lost in the 1960s due to excessive groundwater pumping, which desiccated the spring system. This species now exists in several refuge habitats in southern and central Nevada, as efforts to restore its original habitat have thus far been unsuccessful.
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The Paddlefish (Polyodon spathula) has declined across its entire range due largely to loss of breeding habitat and overharvest, with much of it as illegal harvesting for caviar. Although conservation efforts have stabilized this species in the Central Mississippi States, a continued decline is expected due to overharvest, introduced species (particularly Asian Carp), and pollution. Other threats include channelization and dam construction that have blocked seasonal migration to suitable spawning sites which isolates individual populations and lead to breeding issues. Some characteristics of its life history, such as length of time to reach sexual maturity, make it susceptible to decline and slow to recover.
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The Shortnose Sturgeon (Acipenser brevirostrum), the smallest of the three sturgeon species that occur in the eastern United States, requires clean rock or rubble above the head of tide for spawning. It has suffered from the construction of dams in the region. This species migrates upriver from lower reaches of river systems or from upper estuary areas to spawn, but has been blocked from reaching spawning areas by dams. Other spawning habitat has been impaired by water flow changes from water withdrawals and dam operations, particularly peaking power operations. Sturgeon species, in general, are very sensitive to changes from the natural water flow conditions.
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The Desert Pupfish (Cyprinodon macularius) is a Federally listed endangered species found in shallow waters of rare desert springs, small streams, and marshes. The typical habitat includes clear water with aquatic plants or algae. These are difficult habitats for fish as they have high salinity water, high water temperatures, and low oxygen concentrations. Decline of the Desert Pupfish has been associated with dam construction, water diversions, groundwater pumping, pesticide drift, and encroachment of non-native vegetation such as Tamarix, also known as Salt Cedar. Salt Cedar can alter riparian habitats and the subsequent shading and roots can alter aquatic habitats.
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The Alabama Sturgeon (Scaphirhynchus suttkusi) has suffered from habitat loss and fragmentation caused by dredging for navigation, peaking hydropower projects, and dam construction. This species requires clean hard substrate with stable daily flows for spawning, and needs connected river reaches for long-distance spawning migrations. Both of these needs have been disrupted by human activities in their range. This fish has disappeared from about 85 percent of its historic range in the Alabama and Tombigbee River systems. The Alabama Sturgeon was placed on the endangered species list in 2000.
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The Redside Dace (Clinostomus elongatus) prefers small to medium, cool, clear, rubble- and gravel-bottomed streams. This type of habitat in streams is disappearing in parts of the region because of excessive sedimentation, altered water flows, and nutrient inputs from farming, mining, and urban development.
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The Pinewoods Darter (Etheostoma mariae) is native to the Little Peedee River system in the Carolina Sandhills area where it is found in smaller, swift-flowing creeks with gravel bottoms and vegetation. This area is becoming increasingly altered by residential development, agriculture, lumbering, and damming of headwater streams, typically for golf course development. Additionally, the reintroduction and rapid expansion of beavers in this drainage is converting some of the critical flowing streams to small impoundments.
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The Northern Madtom (Noturus stigmosus) is a small member of the catfish family that requires fast currents and complex rocky habitat. It faces a host of habitat threats including competition with invasive species, climate change, siltation, loss of habitat, excessive turbidity, and poor water quality. Channelization of small streams in this region is a significant threat to this species.
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The Pallid Sturgeon (Scaphirhynchus albus) once ranged throughout the Missouri and Mississippi Rivers and requires moderate to swift rivers with both sand and rock substrates. This long-lived species, often living more than 50 years and growing to 90 pounds, requires un-fragmented river reaches to complete its life history. River channelization, bank stabilization, impoundments, and altered flow regimes have all negatively affected this species, which is listed under the Federal Endangered Species Act. The presence of multiple large dams on the Missouri River has truncated the distance the larvae can be free-floating and may cause them to settle out in the reservoirs and perish. Adult Pallid Sturgeon are not able...
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Historically, American Shad (Alosa sapidissima) spawned in virtually every river and tributary along the Atlantic coast and was relied on by Native Americans and early Europeans as a food source. Early declines in abundance of American Shad have been attributed to dam construction, overfishing and degradation of riverine habitats. Water pollution contributed to the decline and resulted in the almost complete disappearance of shad in many watersheds along the Atlantic Coast. The American Shad used to spawn as much as 300 miles upstream in some of the larger tributary watersheds such as the Susquehanna River; however many dams now block fish passage to their historic spawning grounds. Between 1998 and 2007, only...
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The Arkansas Darter (Etheostoma cragini) is native to the Arkansas River drainage and is known to move extensively in this system in response to varying stream flows. It requires shallow water gravel habitat or woody debris for spawning. Stream dewatering and decreased flows caused by groundwater pumping have affected populations of this darter. Water quality degradation has also been an issue and is often the result of intensive livestock grazing and trampling of stream banks, application of animal wastes as fertilizer to cropland, salt-water intrusion into groundwater, and spills from concentrated animal feed operations.
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Historical pictures and accounts document the substantial decline of Alligator Gar ( Atractosteus spatula) throughout its range. A number of factors likely contributed to the decline, including angler overharvest and habitat loss resulting from dredging and damming southern rivers. Alligator Gar was a highly sought sport and commercial fish by some but was targeted for eradication or control by others as a “trash fish.” Studies in Alabama, Mississippi, and Louisiana have shown that the Alligator Gar is susceptible to overfishing. It has been classified as rare in Missouri, threatened in Illinois, and endangered in Arkansas and Kentucky, and is expected to soon to be classified as endangered in Tennessee. Populations...
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The Blackbanded Sunfish ( Enneacanthus chaetodon) inhabits acidic swamps, backwaters, and ponds. Although once a widespread species, it is disappearing from much of its former range. Forest clearing, loss of beavers, liming of farm fields, and stream channelization have reduced the amount of habitat available for this rare species.
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Aquatic vegetation is the key to Bridle Shiner (Notropis bifrenatus) survival. The loss of aquatic vegetation makes this species vulnerable to predation, often by piscivorous fishes. Land use practices that increase turbidity also affect this visual predator.
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The Topeka Shiner ( Notropis topeka ) requires prairie streams or oxbows that have good water quality and cool to moderate temperatures. Land practices that increase siltation, such as agricultural use, clear-cut logging, urban development, and intensive grazing, have negatively affected this fish species which is now listed as endangered under the Federal Endangered Species Act. Excessive sedimentation from poorly planned and controlled human development covers fish eggs, reduces instream cover, and fills in gravel areas needed for feeding.
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The Sacramento River represents by far the largest population of returning Chinook Salmon (Oncorhynchus tshawytscha). There are four distinct spawning runs of Chinook Salmon; fall, late fall, winter, and spring. Historically, maximum spawning runs in the Central Valley approached 2 million salmon including: 100,000 late-fall fish; 200,000 winter fish; 700,000 spring fish; and 900,000 early fall fish. Current spawning sizes are a fragment of historic numbers and some of the spawning runs are listed stocks under the Federal Endangered Species Act. In 2009, total Chinook Salmon spawning populations were fewer than 69,000 salmon including: 50,000 fall fish; 10,000 late-fall fish; 3,800 spring fish; and 4,700 winter...
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Although Alaska has substantial intact habitats, issues quickly appear in areas associated with development. The Arctic Grayling (Thymallus arcticus) requires large intact reaches of river to thrive. Some populations are stressed in developed areas as a result of habitat loss due to poorly designed road crossings that fragment streams along with poorly conducted mining, agricultural, and forestry practices.
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Lake Sturgeon (Acipenser fulvescens) is the largest species (maximum weight between 300-400 lbs.), longest lived (50-year-olds are common but can reach over 100 years in age), and among the slowest maturing species (first reproduction is between 15-25 years old) found in the Great Lakes region. Historically, this species had populations that numbered in the millions basin-wide but had been reduced to remnant populations by 1920 from overharvest; habitat destruction from river channel alteration, landscape scale logging, and pollution from industrialization; and barrier construction. The Lake Sturgeon requires clean rock substrates for spawning and often undertakes long migrations to complete its life history. Although...
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The Shoal Bass (Micropterus cataractae) is one of a number of unique, lesser-known native bass species that have very restricted distributions. Juveniles and adults of this species require riffle and pool habitat with clean gravel substrate for spawning. Although the exact mechanism of population declines for this species has not been proven, the Apalachicola-Chattahoochee-Flint basin where Shoal Bass occur is the second-most impounded basin east of the Mississippi River, with more than 1,400 impoundments. The dams have fragmented and destroyed habitats through inundation, altered water flows, changed temperature regimes, and allowed the establishment of similar competing non-native basses, such as the Spotted...


map background search result map search result map Habitat Trouble for Green and White Sturgeon in Pacific Coast States Habitat Trouble for American Shad in Mid-Atlantic States Habitat Trouble for Redside Dace in Upper Midwest States Habitat Trouble for Shoal Bass in Southeast Atlantic States Habitat Trouble for Pacific Chinook Salmon and Coho Salmon in Pacific Coast States Habitat Trouble for Arctic Grayling in Alaska Habitat Trouble for Pallid Sturgeon in Northern Plains States Habitat Trouble for Bridle Shiner in Northeastern States Habitat Trouble for Alligator Gar in Eastern Gulf of Mexico States Habitat Trouble for Pinewoods Darter in Southeast Atlantic States Habitat Trouble for Shortnose Sturgeon in Northeastern States Habitat Trouble for Paddlefish in Central Mississippi River States Habitat Trouble for Topeka Shiner in Northern Plains States Habitat Trouble for Blackbanded Sunfish in Mid-Atlantic States Habitat Trouble for Arkansas Darter in Southern Plains States Habitat Trouble for Alabama Sturgeon in Eastern Gulf of Mexico States Habitat Trouble for Northern Madtom in Central Midwest States Habitat Trouble for Pahrump Poolfish in Southwestern States Habitat Trouble for Lake Sturgeon in Upper Midwest States Habitat Trouble for Desert Pupfish in Southwestern States Habitat Trouble for American Shad in Mid-Atlantic States Habitat Trouble for Blackbanded Sunfish in Mid-Atlantic States Habitat Trouble for Shoal Bass in Southeast Atlantic States Habitat Trouble for Pinewoods Darter in Southeast Atlantic States Habitat Trouble for Pallid Sturgeon in Northern Plains States Habitat Trouble for Topeka Shiner in Northern Plains States Habitat Trouble for Bridle Shiner in Northeastern States Habitat Trouble for Shortnose Sturgeon in Northeastern States Habitat Trouble for Northern Madtom in Central Midwest States Habitat Trouble for Paddlefish in Central Mississippi River States Habitat Trouble for Redside Dace in Upper Midwest States Habitat Trouble for Lake Sturgeon in Upper Midwest States Habitat Trouble for Alligator Gar in Eastern Gulf of Mexico States Habitat Trouble for Alabama Sturgeon in Eastern Gulf of Mexico States Habitat Trouble for Green and White Sturgeon in Pacific Coast States Habitat Trouble for Pacific Chinook Salmon and Coho Salmon in Pacific Coast States Habitat Trouble for Pahrump Poolfish in Southwestern States Habitat Trouble for Desert Pupfish in Southwestern States Habitat Trouble for Arkansas Darter in Southern Plains States Habitat Trouble for Arctic Grayling in Alaska