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This dataset contains information from visual encounter surveys conducted between 2012 and 2016 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort in the Oregon Cascade Mountain Range. We surveyed 91 sites using a rotating frame design in the Klamath and Deschutes Basins, Oregon, which encompass most of the species' core extant range. Data consist of spotted frog counts aggregated by date, location, and life stage, as well as data on environmental conditions at the time of each survey.
Categories: Data;
Tags: Aquatic ecology,
Cascade Range,
Deschutes County,
Klamath County,
Lane County,
The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
Snags provide critical habitat for nearly one-third of wildlife species in forests of the Pacific Northwest, so historic declines in snags are thought to have had a strong impact on biodiversity. Resource managers often create snags to mitigate the scarcity of snags within managed forests, but information regarding the function and structure of created snags across long time periods (>20 years) is absent from the literature. Using snags that were created by topping mature Douglas-fir trees (Pseudotsuga menziesii) as part of the OSU College of Forestry Integrated Research Project, we measured characteristics of 731 snags and quantified foraging and breeding use of snags by birds 25-27 years after their creation....
***This dataset is superseded by Adams, M.J., Pearl, C.A., McCreary, B., Galvan, S.K., and Rowe, J.C., 2019, Oregon Spotted Frog (Rana pretiosa) Monitoring at Jack Creek 2015-2018 (final): U.S. Geological Survey data release, https://doi.org/10.5066/P9L2XC5B.*** This dataset contains information from mark-recapture surveys conducted in 2015 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts aggregated by date, location, life stage, and sex, as well data on environmental conditions at the time of each survey.
This dataset contains data supporting the paper: DeCrappeo, N.M., DeLorenze, E.J., Giguere, A.T., Pyke, D.A., and Bottomley, P.J. Fungal and bacterial contributions to nitrogen cycling in cheatgrass-invaded and uninvaded native sagebrush soils of the western USA (accepted at the journal Plant and Soil). The purpose of the study was to evaluate the relative contributions of soil bacteria and fungi to inorganic nitrogen (N) cycling in sagebrush and cheatgrass-invaded soils using a 15N isotope dilution experiment. Soils were collected from sagebrush and cheatgrass rhizospheres at six paired sites in southwest Idaho and southeast Oregon. In order to partition the contribution of each microbial group to N cycling, soils...
Stream segments, aquatic organism captures, stream surveys, and road-stream crossings described by these metadata accompany a 2012 electrofishing study of the distribution and abundance of aquatic organisms (fish, lampreys, amphibians and crayfish), conducted by the U.S. Geological Survey, and the Pacific Northwest Region Aquatic and Riparian Ecosystem Monitoring Project (AREMP) of the U.S. Forest Service, in the Siuslaw National Forest in western Oregon, USA. The purpose of the study was to quantify the effectiveness of stream-road crossing restoration (culvert replacement to the stream simulation standard) in terms of numbers of fish and length of stream gained through restoration, and to quantify the continuing...
This dataset contains information from visual encounter surveys conducted between 2012 and 2016 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort in the Oregon Cascade Mountain Range. We surveyed 91 sites using a rotating frame design in the Klamath and Deschutes Basins, Oregon, which encompass most of the species' core extant range. Data consist of spotted frog counts aggregated by date, location, and life stage, as well as data on environmental conditions at the time of each survey.
Mercury is a globally distributed pollutant that threatens human and ecosystem health. Even protected areas, such as national parks, are subjected to mercury contamination because it is delivered via atmospheric deposition, often after long-range transport. In aquatic ecosystems, certain environmental conditions can promote microbial processes that convert inorganic mercury to an organic form (methylmercury). Methylmercury biomagnifies through food webs and is a potent neurotoxicant and endocrine disruptor. This dataset contains data on the length, mass, and muscle total mercury concentration of Brown Trout (Salmo trutta) and Rainbow Trout (Oncorhynchus mykiss) collected from the Colorado River in Glen Canyon National...
Categories: Data;
Types: Citation;
Tags: Arizona,
Bright Angel Creek,
Colorado River,
Glen Canyon National Recreation Area,
Grand Canyon National Park,
Land management practices often directly alter vegetation structure and composition, but the degree to which ecological processes such as herbivory interact with management to influence biodiversity is less well understood. We hypothesized that intensive forest management and large herbivores have compounding effects on early-seral plant communities and plantation establishment (i.e., tree survival and growth), and the degree of such effects is dependent on the intensity of management practices. We established 225 m2 wild ungulate (deer and elk) exclosures nested within a manipulated gradient of management intensity (no-spray Control, Light herbicide, Moderate herbicide and Intensive herbicide treatments), replicated...
Categories: Data;
Types: Citation;
Tags: Ecology,
Lincoln County, Oregon,
Oregon,
Oregon Coast Range,
Pacific Northwest,
Data are contained in a Microsoft Access database consisting of 27 data tables. Tables provided include emergency stabilization and rehabilitation (ESR) projects sampled, study plot characteristics, and sampled vegetation and fuels data. All data are from Bureau of Land Management (BLM) federal lands within the Great Basin region of the intermountain west. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
This dataset contains biocrust lichen and moss cover at 186 plots at Horse Heaven Hills in Washington, USA. These data were measured by Jeanne Ponzetti in 1999 and remeasured by Heather Root in 2020. In addition to the biocrust data, we include site data such as elevation, location, wildfire history, and cover classes of dominant plants, rock and soil.
Categories: Data;
Tags: Botany,
Bromus tectorum,
Columbia Basin,
Ecology,
Horse Heaven Hills, Washington,
The dataset includes the bird species, sex, mercury concentration in breast feathers and whole blood, and the composite measure of fluctuating asymmetry. Statistical models were developed for each species to analyze the relationship between mercury exposure in either breast feathers or whole blood and the composite measure of fluctuating asymmetry, while accounting for the sex of each bird.
The data sets contains hierarchical taxonomic identification information for DNA sequences detected in water samples from 5 locations.
Categories: Data;
Tags: Aquatic Biology,
Decision-Making Support and Tools,
Ecology,
Mammals,
Nevada,
These datasets include occurrence points and trait data for freshwater fishes, amphibians, and reptiles native to Oregon State. Occurrence data were extracted from the VertNet database and include points within Oregon, Washington, and Idaho, as well as points found within ecoregions that overlap with Oregon state (U.S. EPA Level III EcoRegions). Occurrence points include records from years 1930-2002, and only records with associated museum voucher specimens were included. Database was updated to include one record per species, per year, at a given location. Records were evaluated by taxonomic experts for each species, and suspicious records were either verified or excluded. Trait data were gathered from published...
The dataset includes specifics on fragments of bullets recovered from shot Belding's ground squirrels from Oregon and California. Ground squirrels were radiographed and then we used ImageJ software to count and measure the area of those bullet fragments. A subset of shot carcasses were then digested and bullet fragments were recovered. Statistical models were developed to predict either the number or mass of bullet fragments in shot ground squirrel carcasses using the radiograph estimates and the digested recovered fragment data.
Categories: Data;
Types: Citation;
Tags: Ammunition,
California,
Christmas Valley, Lake County, OR,
Crane, Malheur County, OR,
Exposure,
The Cosumnes River Preserve in the California’s Central Valley contains a mosaic of managed wetlands where conditions may promote high levels of methylmercury bioaccumulation. In order to document potential environmental health risk in these wetlands due to mercury, we analyzed dragonfly larvae, western mosquitofish, and tree swallow eggs collected from wetlands and rice fields of the Preserve from 2011 to 2013.
Categories: Data;
Types: Citation;
Tags: Aquatic Biology,
Consumnes River Preserve,
Ecology,
Environmental Health,
USGS Science Data Catalog (SDC),
The data are included in 8 separate text files: 1) "Sample_coordinates.txt". The file contains sample identifiers along with geographic coordinates associated with each sample. Coordinates are specified as UTM Zone 10 values (WGS84). 2) "Sample_genotypes.txt". The file contains a sample identifier along with microsatellite genotypes associated with each sample. 3) "uniform_conductances.asc". An ASCII text-based representation of a map containing idealized habitat for Northern Spotted Owls. 4) "1870_conductance.asc". An ASCII text-based representation of a map containing idealized habitat for Northern Spotted Owls in the 1870's. 5) "1940_conductance.asc". An ASCII text-based representation of a map containing idealized...
This data release includes: (1) The data from simulations used to illustrate the behavior of inbreeding rate estimators. Estimating inbreeding rates is particularly difficult for natural populations because parentage information for many individuals may be incomplete. Our analyses illustrate the behavior of a newly-described inbreeding rate estimator that outperforms previously described approaches in the scientific literature. (2) Python source code ("analytical expressions", "computer simulations", and "empricial data set") that can be used to analyze these data.
The data were generated as part of a study to determine if buccal (oral) swabs could be used to obtain genetic material from Red-Cockaded Woodpecker chicks. Different swab types were investigated to determine if any specific type gave the highest DNA yields.
Categories: Data;
Tags: Biota,
DNA,
Red-Cockaded Woodpecker,
USGS Science Data Catalog (SDC),
buccal swab,
This dataset includes bird species, invertebrate order and family, sample identification codes, collection date, latitude, longitude, site name, bird age, invertebrate life stage, invertebrate trophic group, carbon and nitrogen stable isotopes in birds and invertebrates, total mercury concentrations in bird blood, and methylmercury concentrations in composite invertebrates.
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Environmental Health,
Oregon,
USGS Science Data Catalog (SDC),
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