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This data set includes geospatial data and tables providing location, environmental, and vegetation data collected in 2017 and 2018 at the Little Saint Francis River (LSFR) chat pile restoration site, Fredericktown, Madison County, Missouri. Restoration actions are being implemeneted as part of the settlement for the Madison County Mines Superfund site to compensate the public for losses of natural resources and the services they provide as part of the Natural Resource Damage Assessment and Restoration Southeast Missouri Lead Mining District case. Data were collected prior to and during the early stages of restoration actions to restore bottomland forest habitat, reduce invasive plant species abundance, and improve...
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Shapefile created by USGS. Channel transects were constructed to be used in evaluating channel widths and channel width variation. Transects were laid out at 0.1 mile intervals along the navigation channel thalweg. They extend perpendicular to thalweg and intersect the bankfull channel margin, delineated from low-altitude aerial orthophotos provided by the US Army Corps of Engineers, 11/1/2012 to 11/21/2012. The bankfull dimensions were digitized by hand. Each transect was additionally attributed with the USGS bend number, Pallid Sturgeon Population Assessment Program (PSPAP) segment number, and PSPAP bend number.
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Macrhybopsis reproduction and propagule traits were studied in the laboratory using two temperature regimes and three hormone treatments and which methods produced the most spawns. Only sicklefin chub (M. meeki) spawned successfully although sturgeon chub (M. gelida) released unfertilized eggs. All temperature and hormone treatments produced M. meeki spawns, but two treatments had similar success rates at 44 and 43%, consisting of a constant daily temperature with no hormone added, or daily temperature fluctuations with hormone added to the water. Spawns consisted of multiple successful demersal circular swimming spawning embraces interspersed with circular swims without embraces. The most spawns observed for one...
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This data was generated from a study in which five experiments were conducted that tested whether and how dissolved chemicals might assist food recognition in two filter-feeding fishes, the silver (Hypophthalmichthys molitrix) and the bighead carp (H. nobilis). The buccal-pharngeal pumping (BPP), a behavior in which fish pump water into their buccal cavities, was observed in both silver and bighead carps after exposure to a a variety of food filtrates and mixtures. In addition, occlusion experiments to determine if the olfactory sense has a very important, but not exclusive, role in bigheaded carp feeding behaviors were conducted.
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Shapefile created by USGS. This is a polygon created from Landsat TM imagery. All Landsat 4-5 TM images overlapping the Missouri River downstream from Gavins Point Dam were identified and examined for lack of clouds. Usable images were classified into sand, vegetation, and water. Classified images were then merged, and the number of times a given pixel was classified as either sand, vegetation, or water were computed. The presented dataset represents pixels which were classified as sand in greater than 5% of images which were collected during a growing season defined as julian day 116-296 (to preclude vegetated islands, which classify as sand outside of foliation), translated into polygons.
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The data provide location and data quality information for ground control points (GCP) deployed at Palmyra Atoll for acquisition of imagery using small unoccupied aerial systems (sUAS) in October 2016. Thales ProMark 3 handheld geographic positioning systems (GPS) were used as both a local base station and to record locations of individual GCPs, with occupancy times of approximately 30 minutes per GCP. Location data for GCPs were post-processed against base station data using Mobile Mapper Office software to yield local position accuracy of approximately 0.1 m.
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Point clouds, high resolution digital surface models (DSM), and high resolution orthoimagery of Palmyra Atoll, USA, were generated from aerial 3-color and 5-band imagery collected October 2016 using Unoccupied Aerial Systems (UAS, or "drones"). Data were processed in sections corresponsing to flight areas using photogrammetry to generate three-dimensional point clouds (.las) by identifying pixels from multiple images representing the same object and calculating the x, y, and z coordinates of that object/pixel. Point clouds for each section were processed to create DSMs (.tif) representing the continuous surface of the uppermost reflective surface (i.e., data have not been filtered for vegetation classes or height)....
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We measured ontogenetic changes in routine and maximum swimming speeds of bighead, grass, and silver carp larvae. Daily measurements of routine swimming speed were taken for two weeks post-hatch using a still camera and the LARVEL program, a custom image-analysis software. Larval swimming speed was calculated using larval locations in subsequent image frames and time between images. Using an endurance chamber, we determined the maximum swimming speed of larvae (post gas bladder inflation) for four to eight weeks post-hatch.
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Data collected from acute 96-hour and chronic 28-day toxicity tests of Aluminum to a commonly tested unionid mussel (Lampsilis siliquoidea) and a commonly tested amphipod (Hyalella azteca) at a pH of 6 and water hardness of 100 mg/L as CaCO3.
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This dataset includes microsomal EROD data from an assay done with liver samples from several fish species that are found in Arizona at sites that are being assessed for PBDE contamination. The data was created in September and October 2016.
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Grass carp, bighead carp, and silver carp spawn in flowing water. Their eggs,and then larvae, develop while drifting. Hydraulic conditions control spawning locations, egg survival, and the downstream distance traveled before the hatched larvae can swim for low velocity nursery habitats. Existing egg drift models simulate the fluvial transport of carp eggs but have limitations in capturing the effect of localized turbulence on egg transport due to inadequate dimensions of hydrodynamics and/or empirical parameterization of river dispersion. We present a three-dimensional Lagrangian particle tracking model that uses fully resolved river hydrodynamics and a continuous random walk algorithm driven by local turbulent...
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We have adapted two commonly used human breast luciferase transactivation cell bioassays, the recently re-named estrogen agonist/antagonist screening VM7Luc4E2 cell bioassay (previously designated BG1Luc4E2) and the androgen/glucocorticoid screening MDA-kb2 cell bioassay, to 384-well formats for HTS of endocrine-active substances. This cost-saving adaptation includes a fast, accurate, and easy measurement of protein amount in each well via the fluorescamine assay (in the form of relative fluorescence units, RFU which are then converted to microgram protein using bovine serum albumin standards) with which to normalize luciferase activity (in the form of relative light units, RLU) of cell lysates without requiring...
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We evaluated the thermal regime and relative abundance of native and non-native fish and invertebrates within Kelly Warm Spring and Savage Ditch, Grand Teton National Park, Wyoming. Water temperatures within the system remained relatively warm year round with mean temperatures less than 20 degrees Celsius near the source, and greater than 5 degress Celsius approximately 2 km downstream of the spring source. A total of 5 non-native species were collected; Convict/Zebra Cichlids (Cichlasoma nigrofasciatum), Green Swordtail (Xiphophorus hellerii), Tadpole Madtom (Noturus gyrinus), Guppies (Poecilia reticulate), and Goldfish (Carassius auratus). Non-native fish (Zebra Cichlids and Swordtails), red-rimmed melania snails...
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Shapefile created by USGS. This is a channel polygon coverage with USGS-delineated bends, each attributed with rive mile (location along river), bend area, thalweg sinuosity, mean channel width, standard deviation of channel width, number of navigation structures per kilometer of channel, total length of navigation structures per kilometer of channel, area of persistent sand, and catch per unit effort of age-0 Scaphirhynchus sturgeon. Each bend is also attributed with statistically determined cluster assignment according to 3-, 4-, and 6-cluster k-means clustering.
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Shapefile created by USGS by generating a centerline between the banks of the Lower Missouri River and identifying inflections in the centerline. Inflections were used to automatically define upstream and downstream limits of the bend. Lateral limits of bends were extended to encompass all of the high banks of the river. The centerline was identified using the river miles of the U.S.Army Corps of Engineers as defined in 1960.
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Advances in drilling technique have facilitated a rapid increase in hydrocarbon extraction from energy shales, including the Williston Basin in central North America. This area overlaps with the Prairie Pothole Region and greater than 35% of wetlands are less than or equal to 1 km from a petroleum-related well. Legacy practices often released saline co-produced waters (brines) that were chloride rich wastes, affecting wetland water quality directly or persisting in sediments. Despite the potential threat of brine contamination to aquatic habitats, there has been little research into their ecological effects. We capitalized on a gradient of legacy brine-contaminated wetlands in northeast Montana to conduct laboratory...
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Invasive crayfish are known to displace native crayfish species, alter aquatic habitat and community structure and function, and are serious pests for fish hatcheries. White River Crawfish (WRC; Procambarus acutus) were inadvertently introduced to a warm-water fish hatchery in Missouri, USA, possibly in an incoming fish shipment. We evaluated the use of chemical control for crayfish to ensure incoming and outgoing fish shipments from hatcheries do not contain live crayfish. We conducted acute (less than or equal to 24 hr) static toxicity tests to determine potency, dose-response, and selectivity of pesticides to WRC, Virile Crayfish (VC; Orconectes virilis), and Fathead Minnow (FHM; Pimephales promelas). Data included...
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Invasive Asian carps established in the United States spawn in turbulent water of rivers and their eggs and early larvae develop while drifting in the current. The eggs are slightly denser than water and are held in suspension by water turbulence. The eggs are believed to perish if they settle before hatching. It is thus possible to use egg drift modeling to assess the capability of a river to support survival of Asian carp eggs. Data to populate such models include the physical properties of the assessed rivers, and information on egg size, density, and terminal fall velocity (sinking rates). Herein, we present the physical characteristics of the eggs as a function of post fertilization time. We recorded mean egg...
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Invasive silver carp (Hypophthalmichthys molitrix) occur in large regions of the Mississippi River drainage, outcompete native species, and are notorious for their prolific jumping behavior. Juvenile and adult (up to 25 kg) carp are known to jump up to 3 m above the water surface in response to moving watercraft. Broadband sound recorded from an outboard motor (100 hp at 32 km/hr) can modulate their behavior in captivity; however, the response of wild silver carp to broadband sound has yet to be determined. This data set includes information regarding the sound produced by outboard motor and speakers in the field and will help in determining effectiveness of the usage of control techniques in the management of carps.
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Management actions intended to increase growth and survival of pallid sturgeon (Scaphirhynchus albus) age-0 larvae on the Lower Missouri River require a comprehensive understanding of the geomorphic habitat template of the river. The datasets described here are intended to support decisions relating to where channel-reconfiguration projects should be located to optimize effectiveness of interception rearing complexes (IRCs). The bend-scale geomorphic classification of the Lower Missouri River is intended to help in the design of monitoring and evaluation of IRC projects. The bend-scale classification was based on geomorphic and engineering variables for 257 bends from Sioux City, Iowa to the confluence with the...


map background search result map search result map Data in support of manuscript "Evaluation of chemical control for invasive crayfish at a warmwater fish production hatchery" Development of a dual luciferase-fluorescamine assay adapted to a 384 micro-well plate format-Data Data for "Comparison of size, terminal fall velocity and density of bighead, silver, and grass carp eggs for use in drift modeling" Microsomal EROD data of fish liver sample assay from species collected in the Salt and Gila Rivers, Arizona Acute and chronic toxicity of aluminum to a unionid mussel (Lampsilis siliquoidea) and an amphipod (Hyallela azteca) in water-only exposures-Data Reproductive strategy, spawning induction, spawning temperatures and early life history of captive sicklefin chub Macrhybopsis meeki-Data Widespread legacy brine contamination from oil shales reduces survival of chorus frog larvae-Data The thermal regime and species composition of fish and invertebrates in Kelly Warm Spring, Grand Teton National Park, WY-Data Ontogenetic changes in swimming speed of silver carp, bighead carp, and grass carp larvae-Data Chemical cues which include amino acids mediate species-specific feeding behavior in invasive filter-feeding bigheaded carps-Data Asian carp acoustic stimuli data Missouri River bend classification data sets Bends of the Lower Missouri River, attributed with geomorphic variables and classified by cluster analysis Bankfull channel transects, Lower Missouri River Persistent sand polygons, Lower Missouri River USGS defined bends, Lower Missouri River Pre-restoration vegetation data, Little Saint Francis River chat pile site, Missouri, USA, 2017 and 2018 Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016 (ver. 1.1, November 2020) Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016-GCPs 2016 Data supporting a new three-dimensional Lagrangian particle tracking model for predicting transport of carp eggs in turbulent rivers Pre-restoration vegetation data, Little Saint Francis River chat pile site, Missouri, USA, 2017 and 2018 Widespread legacy brine contamination from oil shales reduces survival of chorus frog larvae-Data Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016-GCPs 2016 Data supporting a new three-dimensional Lagrangian particle tracking model for predicting transport of carp eggs in turbulent rivers Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016 (ver. 1.1, November 2020) The thermal regime and species composition of fish and invertebrates in Kelly Warm Spring, Grand Teton National Park, WY-Data Missouri River bend classification data sets Persistent sand polygons, Lower Missouri River Bankfull channel transects, Lower Missouri River Bends of the Lower Missouri River, attributed with geomorphic variables and classified by cluster analysis USGS defined bends, Lower Missouri River