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wy_lvl7_coarsescale: Wyoming hierarchical cluster level 7 (coarse-scale) for Greater sage-grouse We developed a hierarchical clustering approach that identifies biologically relevant landscape units that can 1) be used as a long-term population monitoring framework, 2) be repeated across the Greater sage-grouse range, 3) be used to track the outcomes of local and regional populations by comparing population changes across scales, and 4) be used to inform where to best spatially target studies that identify the processes and mechanisms causing population trends to change among spatial scales. The spatial variability in the amount and quality of habitat resources can affect local population success and result in different...
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Nocturnal visual encounter survey data conducted by 29 searchers over 17 transects obtained during a Brown Treesnake rapid response deployment to island of Saipan in 2016. Surveys took place in the vicinity of the Saipan airport and Dandan village (ca. 15.127°N, 145.735°E) from 06 January to 13 March 2016, 6–7 nights/week but with a break in surveying from 26 January through 21 February. During Brown Treesnake searches over 386.8 kilometers, we collected data on selected vertebrate taxa (lizards and small mammals, both potential snake prey) recorded from survey transects with similar vegetation structure (secondary forest dominated by the introduced leguminous tree Leucaena leucocephala; emergent trees were partially...
We investigated population dynamics in chorus frogs (Pseudacris maculata) relative to extrinsic (air temperatures and snowpack) and intrinsic (density dependence) characteristics at 2 sites in Colorado, USA. We used capture-mark-recapture (cmr) data (i.e., 1 or 0, provided here) and a Bayesian model framework to assess our a priori hypotheses about interactions among covariates and chorus frog survival and population growth rates. Files include: Cameron_Lily_cmr_NOV2020.csv, Cameron_Matthews_cmr_NOV2020.csv, and Cameron_covariates_NOV2020.csv. Data associated with paper by Kissel et al. 2021.
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wy_lvl2_finescale: Wyoming hierarchical cluster level 2 (fine-scale) for Greater sage-grouse We developed a hierarchical clustering approach that identifies biologically relevant landscape units that can 1) be used as a long-term population monitoring framework, 2) be repeated across the Greater sage-grouse range, 3) be used to track the outcomes of local and regional populations by comparing population changes across scales, and 4) be used to inform where to best spatially target studies that identify the processes and mechanisms causing population trends to change among spatial scales. The spatial variability in the amount and quality of habitat resources can affect local population success and result in different...
This data release comprises a dataset that contains sample collection information and microsatellite genotypes, and another dataset that contains single nucleotide polymorphism (SNP) genotypes with sample collection information for populations of white-tailed ptarmigan across the species' range. There is also an additional file (accession numbers.xlsx) linking samples to accession numbers in Genbank. This data was collected in order to address the following: The delineation of intraspecific units that are evolutionarily and demographically distinct is an important step in the development of species-specific management plans. Neutral genetic variation has served as the primary data source for delineating units for...
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Data were collected on plant abundance in Illinois with the goal of determining correlations between the abundance of dominant plant taxa and other plant species.
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Data were collected in 2017 by researchers at the USGS, USDA-ARS, and University of Wyoming on the food webs of plants, prairie dogs, arthropods, and birds in the Thunder Basin National Grassland. Data were collected from 87 sites in order to parameterize a structural equation model linking prairie dog impacts to changes in vegetation, arthropods, and birds. Abiotic information such as topographic wetness index, terrain roughness, and soil characteristics were estimated at the same set of plots in order to account for abiotic variation across the landscape.
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Data were collected on seed production dynamics of long-lived plants, reproductive plant traits of those plant species, and weather variability for sites where those species live. Data include the coefficient of variation in seed production over time, the variation (coefficient of variation or standard deviation) in weather over years, and reproductive traits such as pollination mode and seed dispersal mechanism. Data series were distributed globally and encompass 920 data series containing 311 plant species. Data series are all 6 or more years in length.
Flea abundance and body condition data for black-tailed prairie dogs on sites treated and not treated with “FipBit” fipronil pellets. We sampled prairie dogs at Conata Basin, Buffalo Gap National Grassland, and Badlands National Park, South Dakota, USA. We sampled fleas from live-trapped prairie dogs during June–October 2018, May–October 2019, and July-August 2020. Prairie dogs were sampled before and after FipBit treatments. We anesthetized each prairie dog with isoflurane and combed it thoroughly for 30 seconds to dislodge fleas, which fell into a plastic bin. Fleas were counted and allowed to recover from anesthesia and placed back on prairie dogs, to minimize any removal effect. We weighed prairie dogs with...
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Oral sylvatic plague vaccine baits (SPV) and placebo baits were distributed once annually from 2013-2016 on treated and non-treated paired plots from 2013-2016. Black-tailed prairie dogs (BTPD) were live-trapped and permanently marked with passive integrated transponders and ear tags on 4 pairs of plots each year from 2013-2017 to provide capture/recapture data for use in estimating BTPD survival. The first data set (CMR_SPV_RAW_CAPTURE_DATA.csv) lists all captures and associated covariates with each line representing data from a single prairie dog. The second data set (CMR_BTPD_WEIGHTS.csv) lists the weight and associated information for each prairie dog at each handling. The third data set (CMR_FLEAS_BY_HOST.csv)...
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Data on body condition and reproduction of Utah prairie dogs at 5 colonies on the Awapa Plateau, Utah, USA, June-August 2013-2016. Utah prairie dogs were live-trapped and sampled on 5 colonies. We recorded the age (juvenile/adult) and mass (nearest 5 grams) of each prairie dog and marked its ears and body with metal tags and passive integrated transponders, respectively, for permanent identification. We measured each prairie dog's right hind foot length (nearest millimeter). We indexed each adult prairie dog's body condition as the ratio between its mass and hind-foot length. Prairie dogs were allowed to recover from anesthesia and released at their trapping locations. We indexed prairie dog reproduction, by colony...
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Active channel as defined by remote sensing before (2010 and after (2011) a 40 year return period flood (December 2010) within the lower Virgin River, Nevada.
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A dataset of caterpillar performance in an experiment manipulating mean and variance of xanthotoxin levels in diet. Caterpillar growth, development time, and egg production of mated females is presented. Data were collected by all authors in 2017 in a laboratory at Colorado State University, Fort Collins, CO.
This data set includes the relative production scenarios for bufflaograss [0.72(Temp) - 0.12(Precip) - 0.04(Sand) + 3.08]; this is the model from Epstein, et al. (1998). Soil texture (percent by weight) came from the Earth Systems Science Center (2008) which provided processed soils data from NRCS (gSSURGO), mean annual temperature (Celsius) and/or mean annual precipitation (millimeters) came from contemporary (1981 - 2010) estimates (Maurer et al. 2002) or a GCM. Global Climate Models (GCM) providing scenarios included: warmer-wetter scenario (CESM1-BGC, RCP4.5, Neale et al., 2010), warmer drier scenario (GISS-E2-R, RCP4.5, Schmidt, 2014), hotter-wetter scenario (Miroc-ESM, RCP8.5, Watanabe et al., 2011), and hotter-drier...
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These data have been collected as part of a cooperative project in between the U.S. Geological Survey, Colorado Springs Utilities, and Colorado Springs City Engineering. This project began in 2005 and has collected macroinvertebrate samples from Fountain Creek and its tributaries to monitor the biological condition of this watershed. Provided in this data release are Multimetric Index (MMI) values of aquatic macroinvertebrate assemblages using four different sampling methods. There are two subsets of these data included: (1) MMI values of macroinvertebrate data collected from 2010 to 2012 at 15 sites as part of an invertebrate sample method comparison Scientific Investigations Report (SIR) titled “Comparability...
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Characterizing genetic structure across a species’ range is relevant for management and conservation as it can be used to define population boundaries and quantify connectivity. Here, we characterized population structure and estimated effective migration in Greater Sage-grouse (Centrocercus urophasianus). Our objectives were to (1) describe large-scale patterns of population genetic structure and gene flow and (2) to characterize genetic subpopulation centers across the range of Greater Sage-grouse. Samples from 2,134 individuals were genotyped at 15 microsatellite loci. Using standard STRUCTURE and spatial principal components analyses, we found evidence for four or six areas of large-scale genetic differentiation...
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This study uses growth in vegetation during the monsoon season measured from LANDSAT imagery as a proxy for measured rainfall. NDVI values from 26 years of pre- and post-monsoon season Landsat imagery were derived across Yuma Proving Ground (YPG) in southwestern Arizona, USA. The LANDSAT imagery (1986-2011) was downloaded from USGS’s GlobeVis website (http://glovis.usgs.gov/). Change in NDVI was calculated within a set of 2,843 Riparian Area Polygons (RAPs) up to 1 km in length defined in ESRI ArcMap 10.2.
This project contains five datasets which are reported in "Understanding metrics of stress in the context of invasion history: the case of the brown treesnake (Boiga irregularis)". Overall, this dataset describes metrics of individual and demographic stress (baseline and 1 hour post-capture corticosterone, body condition, and bacterial killing ability) in the invasive snake Boiga irregularis on Guam collected in intervals of 10-15 years from 1992 to 2018. It also contains corticosterone values obtained from different methods of measuring hormones ( radioimmunoassay; RIA versus enzyme immunoassay; EIA) for 2018 data. The first dataset is from the file "boiga_18cort_method.csv", which contains baseline and 1 hour-after-capture...
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Data were collected on the abundance of plants in a 10-year weeding experiment of garlic mustard, located at Trillium Trails Park in Pennsylvania. Garlic mustard was weeded annually to suppress its abundance, and the impacts of garlic mustard were measured based on the response of the plant community to garlic mustard weeding. Because garlic mustard is known to suppress mycorrhizal fungi, the mycorrhizal status of each plant species was determined and recorded. The experiment was arranged in a blocked design, where plots had subareas with and without garlic mustard removal. Cover of each plant species was measured as the average percent cover recorded in 18 2x2 meter quadrats with garlic mustard removed per plot...
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Data on the degree and duration of deltamethrin flea control on prairie dog colonies, with 3 prairie dog species at 6 sites across 3 US states. Fleas were combed (COMB) from live-trapped prairie dogs or swabbed (SWAB) from prairie dog burrows on non-treated (Non) sites and nearby sites treated with deltamethrin dust for flea control (Dusted). Each line of data is from an individual prairie dog or burrow. The first set of data, Shortterm BACI, includes data from before-after-control-impact (BACI) experiments comparing the abundance of fleas on prairie dogs at paired non-treated and treated sites in 2 time intervals: before treatments (Before) and 2 to 65 days after treatments (After). The second set of data, Moderate...
map background search result map search result map Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 Multimetric Index macroinvertebrate values from the Fountain Creek Basin, Colorado 2005 to 2016 Laboratory Data on Cabbage Looper Moth Response to Xanthotoxin, 2018 Visual Surveys Rapid Response Saipan 2016 Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Cluster Level 2 (Wyoming), Interim Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Cluster Level 7 (Wyoming), Interim Measurements of plant abundance with reference to dominant plants in Illinois wetlands Data on the Degree and Duration of Deltamethrin Flea Control on Prairie Dog Colonies in Montana, South Dakota, and Utah, USA Active channel in the Lower Virgin River before and after a 40 yr flood (December 2010) Data on prairie dogs, plants, arthropod biomass, and birds for Thunder Basin, Wyoming in 2017 Data on the impacts of garlic mustard from a weeding experiment in Pennsylvania 2006-2016 Flea abundance and body condition data for black-tailed prairie dogs on sites treated and not treated with “FipBit” fipronil pellets, South Dakota, 2018-2020 Data on Utah prairie dog body condition and reproductive success, Awapa Plateau, Utah, USA, 2013-2016 Black-tailed prairie dog capture data from plots treated and not treated with oral plague vaccine from 2013-2017 in Montana Chorus frog density and population growth, Cameron Pass, Colorado, 1986-2020 Metrics of individual and demographic stress in the invasive Brown treesnake on Guam from 1992-2018 Microsatellite data, boundaries of subpopulation centers, and estimated effective migration for greater sage-grouse collected in western North America between 1992 and 2015 (ver. 2.0, December 2022) Chorus frog density and population growth, Cameron Pass, Colorado, 1986-2020 Visual Surveys Rapid Response Saipan 2016 Black-tailed prairie dog capture data from plots treated and not treated with oral plague vaccine from 2013-2017 in Montana Metrics of individual and demographic stress in the invasive Brown treesnake on Guam from 1992-2018 Active channel in the Lower Virgin River before and after a 40 yr flood (December 2010) Laboratory Data on Cabbage Looper Moth Response to Xanthotoxin, 2018 Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 Data on Utah prairie dog body condition and reproductive success, Awapa Plateau, Utah, USA, 2013-2016 Data on prairie dogs, plants, arthropod biomass, and birds for Thunder Basin, Wyoming in 2017 Data on the impacts of garlic mustard from a weeding experiment in Pennsylvania 2006-2016 Measurements of plant abundance with reference to dominant plants in Illinois wetlands Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Cluster Level 2 (Wyoming), Interim Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Cluster Level 7 (Wyoming), Interim Data on the Degree and Duration of Deltamethrin Flea Control on Prairie Dog Colonies in Montana, South Dakota, and Utah, USA Microsatellite data, boundaries of subpopulation centers, and estimated effective migration for greater sage-grouse collected in western North America between 1992 and 2015 (ver. 2.0, December 2022)