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Assessing the distribution and abundance of both predator and prey (forage) fish species is a cornerstone of ecosystem-based fishery management, and supports decision making that considers food-web interactions. In support of binational Great Lakes fishery management the objectives of this survey were to: provide estimates of densities of key forage and predator species in the western basin of Lake Erie, to assess seasonal and spatial distributions of fishes in tandem with water quality information, and to assess year class strength. A systematic grid sampling approach with 41 stations was sampled via bottom trawl during June (Spring) and September (Autumn), starting in 2013. This data release adds 2021 data to...
Categories: Data;
Tags: Aquatic Biology,
Biota,
Bottom trawl survey,
Ecology,
Freshwater ecosystems,
Hydroacoustic estimates of fish density are used for fisheries management in central Lake Erie. Data are sometimes collected from multiple vessels, raising the question of comparability of data collected among vessels. Hydroacoustic data were collected along three cross-lake transects in central Lake Erie in July, 2014 from three different vessels using similar equipment. Several variables derived from hydroacoustic data and fish densities calculated from those variables were compared between the standard vessel used typically for hydroacoustic data collection and two other vessels used occasionally. The data used in those analyses are presented here.
Categories: Data;
Tags: Aquatic Biology,
Great Lakes,
Lake Erie,
Remote Sensing,
USGS Science Data Catalog (SDC),
These data were compiled as part of a larger study to evaluate post-stocking survival of hatchery-reared Roundtail Chub. We conducted a two year study (Dec. 2015 – Mar. 2017) in the upper Verde River at the Burnt Ranch stocking location near Paulden, Arizona. Young of year Roundtail Chub were acquired from the Arizona Research and Conservation Center in Cornville, Arizona. Passive integrated transponder (PIT) tags (BioMark, 12.5 mm 134.2 kHz FDX) were implanted into Roundtail Chub each year (n = 333, Year 1; n = 2177, Year 2) prior to stocking. Each year, fish were measured (total length, TL, mm) before release (reflected in Pre-Stocking data table). We used two methods to recapture stocked fish, one passive and...
These data were compiled to allow further understanding of how aboveground net primary production of different plant functional types in ecosystems along an elevation gradient in the southwestern U.S. respond to extreme changes in warm-season precipitation (drought and water addition) associated with the North American Monsoon. The objectives of the study were to 1) determine how primary production responds to warm-season precipitation extremes over time; 2) compare production sensitivities to warm-season precipitation (slopes of production – precipitation relationships) across an elevation gradient; 3) evaluate whether the sensitivity of production differed under extreme dry and wet years compared to ambient precipitation....
These data were compiled to provide seed transfer and native plant materials development guidance to managers and practitioners across the Colorado Plateau and in adjacent regions. This data release contains empirical seed transfer zones derived from molecular genetic data for Cleome lutea (syn. Peritoma lutea) and Machaeranthera canescens (syn. Dieteria canescens). These species show distinct population structure (i.e., genetic differentiation) across their ranges; as such, seed transfer zones reflect both patterns of genetic differentiation and information on each species' unique adaptations to climatic gradients. These shapefile data may support successful restoration outcomes if, for example, seed transfer follows...
We evaluated lead poisoning in bald and golden eagles during all seasons of the year and from states in each of the four major flyways throughout the continental USA.
Categories: Data;
Tags: Acute poisoning,
Bald eagle,
Chronic poisoning,
Demographic impacts,
Ecology,
Annotated bibliography of grazing effects on amphibians and their habitats (ver. 2.0, February 2022)
This database contains literature citations and associated summaries pertaining to livestock grazing effects on amphibians and their habitats, with an emphasis on the Oregon spotted frog (Rana pretiosa) and other listed/sensitive wetland-breeding amphibians in the western United States. This is not meant to be an exhaustive list, nor did we perform a systematic meta-analysis; rather, literature records were included based on topical relevance. *HINT: If you are looking for the database SEARCH TOOL, scroll down to 'Attached Files' and download 'Annotated_bibliography_with_search_tool.accdb.' Open the database file to enter the search form.* This data release supersedes Rowe, J.C., Pearl, C.A., Adams, M.J., and McCreary,...
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Land Use Change,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Intracoelomic implantation of electronic tags has become a common method in fishery research, but rarely are fish examined by scientists after release to understand the extent that surgical incisions have healed. Walleye (Sander vitreus) are a valuable, highly-exploited fishery resource in the Laurentian Great Lakes. Here, fishery capture of walleye with internal acoustic transmitters combined with a high reward program provided multiple opportunities to examine photographs and quantify the status of surgical incisions. Walleye (n=926) from reef and river spawning populations in Lake Erie and Lake Huron were implanted with acoustic transmitters during spring spawning events from 2011 to 2016. Incisions were closed...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Detroit,
Lake Huron,
Lower Maumee,
Plant and animal tagging,
Sandusky,
Vegetative buffer strips have been demonstrated to effectively reduce loads of sediment, nutrients, and herbicides in surface runoff, but their effectiveness for reducing veterinary antibiotic loads in runoff has not been well documented. Surface runoff simulation where performed to determine the effectiveness of Vegetative buffer strips vegetation and width on surface runoff loads of the veterinary antibiotics sulfamethazine and lincomycin. The three datasets in this release document 1. physical and chemical soil properties for soil located on experimental vegetated buffer strip plots prior to surface runoff simulations; 2. Rainfall simulator performance data and antecedent soil water content data for all vegetated...
Exotic annual grasses [EAG] are one of the most damaging biological stressors in western North America. Despite numerous environmental and societal impacts associated with EAG there remains a need to enhance regional monitoring capabilities to better guide management and conservation efforts. Here we provide estimates of historic and potential future trends in EAG abundance that were developed using linear trend analysis and machine learning techniques at a 30-m spatial resolution. Specifically, these data represent historic (1985 to 2019) and potential future (2025-2040) rates of exotic annual grass change as estimated using Theil-Sen regression and a process-constrained, random forest model assuming only changes...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Ecology,
Exotic annual grasses, cheatgrass, remote sensing,
Exotic annual grasses, cheatgrass, remote sensing,
Land Use Change,
Remote Sensing,
Exotic annual grasses are one of the most damaging biological stressors in western North America and increase the susceptibility of landscapes to wildfire occurrence. Here we couple estimates of long-term rangeland component fractions (e.g. exotic annual grasses) with remote sensing, climate data, and machine learning techniques to estimate the long-term (1985 to 2019) probability of wildfire occurrence (30-m spatial resolution) in sagebrush-dominated landscapes of the western United States.
This data release contains relevant datasets used in the analysis for the Chesapeake Bay stressor identification project, for which results are described in Fanelli and others (2022). For this project, two existing information sources were compiled and summarized to identify key in-stream stressors reported by the scientific literature or through regulatory assessments to be likely affecting benthic macroinvertebrate community metrics in the Chesapeake Bay region: 1) the peer reviewed multi-stressor literature, in which the effects multiple in-stream stressors on benthic macroinvertebrate community metrics are simultaneously assessed; and 2) reported causes of biological impairment as listed by state or district...
During summer 2019, botanists with the Maine Natural Areas Program collected data from 94 vegetation plots for plant community characterization. The sampling data were entered into the National Park Service PLOTS version 4.0 (National Park Service 2018) for analyses to characterize vegetation associations in the U.S. National Vegetation Classification. An accuracy assessment was performed on the draft version of the vegetation map layer. During the summer of 2020, field crews collected data from 107 stratified and randomly selected sites for evaluating the accuracy of the vegetation map layer for those map classes representing U.S. National Vegetation Classification associations. The accuracy assessment field data...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Accuracy Assessment,
Data Collection,
Katahdin Woods and Waters National Monument,
Maine,
Map,
The Aga, also known as the Mariana Crow, is an endangered endemic crow of the Northern Mariana Islands, a Commonwealth of the United States of America. The only known population currently extant is on the island of Rota and has been in decline over the past two decades. Unknown pathogens are among the factors that may be contributing to this decline. To support metagenomic and transcriptomic analysis of potential disease agents, a reference genome was generated and gene features comprehensively annotated. The methods used and data availability are described. This data release consists of: 1. Gene annotations for the endangered Aga or Mariana Crow, including summary statistics, that are available from the National...
Data represent reports of capture of black carp by commercial fishers and biologists with information regarding size characteristics of collected individuals, dimensions of capture gears, and spatial and temporal distributions of captures.
First, we would like to thank the wildland fire advisory group. Their wisdom and guidance helped us build the dataset as it currently exists. This dataset is comprised of two different zip files. Zip File 1: The data within this zip file are composed of two wildland fire datasets. (1) A merged dataset consisting of 40 different wildfire and prescribed fire layers. The original 40 layers were all freely obtained from the internet or provided to the authors free of charge with permission to use them. The merged layers were altered to contain a consistent set of attributes including names, IDs, and dates. This raw merged dataset contains all original polygons many of which are duplicates of the same fire. This dataset...
These data were compiled for an outreach article published in the Boatman's Quarterly Review, which is a magazine published by Grand Canyon River Guides Association. The objectives of our study was to describe the outcomes of the 2018-2020 Bug Flows experiment to a general audience. These data represent 10 years (2012-2021) of invertebrate data and 100 years (1921-2021) of flow data. These data were collected from the Colorado River in Glen Canyon National Recreation Area and Grand Canyon National Park. These data were collected by recreational river runners through a community science effort where we provided river runners with light trapping equipment to sample emergent aquatic insects each night of their expeditions....
This data release is comprised of data tables of input variables for seawaveQ and surrogate models used to predict concentrations of select pesticides at six U.S. Geological Survey National Water Quality Network (NWQN) river sites (Fanno Creek at Durham, Oregon; White River at Hazleton, Indiana; Kansas River at DeSoto, Kansas; Little Arkansas River near Sedgwick, Kansas; Missouri River at Hermann, Missouri; Red River of the North at Grand Forks, North Dakota). Each data table includes discrete concentrations of one select pesticide (Atrazine, Azoxystrobin, Bentazon, Bromacil, Imidacloprid, Simazine, or Triclopyr) at one of the NWQN sites; daily mean streamflow; 30-day and 1-day flow anomalies; daily median values...
Raw sequencing data as generated by the five different methods used are provided for each of the three samples used in the comparison. The files are in FASTQ format as exported from the Oxford Nanopore’s MK1C using MinION flowcells. Files are labeled according to the method (as described in the paper) and the Sample ID). The MK1C exports data in blocks of 6000 reads per FASTQ file and all the FASTQ files from each method and sample are grouped in a common folder.
Categories: Data;
Tags: CONUS,
Emerging Infectious Disease,
Highly Pathogenic Avian Influenza Virus,
Methods Comparison,
Methods Development,
Data used in the Maumee River omics publication, Multi-omics responses in tree swallow (Tachycineta bicolor) nestlings from the Maumee Area of Concern, Maumee River, Ohio. Tseng et al. 2023 Sci. Total Environ. 856:159130
Categories: Data;
Tags: EROD,
Ecology,
Environmental Health,
USGS Science Data Catalog (SDC),
Wildlife Biology,
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